| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0078 |
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| Symbol | trmB |
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| ID | 4171779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 91179 |
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| End bp | 91898 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053077 |
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| Product | tRNA (guanine-N(7)-)-methyltransferase |
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| Protein accession | YP_659664 |
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| Protein GI | 109896409 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
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| TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.892836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAT TTAAATCCAA AGAAGAAGCA GCCGAATCCG GCGTTTATAT CCGTAAAATC
CAGAGCTTTG TTAAGCGCGA AGGTCGTTTA ACCAAGGGCC AAGAAAAGGC AATTGAAAGC
AATTGGGAAA CCATGGGCTT AGAGCATAAA TCTGGTTTGC TCGATATGAA CGAAGTGTTT
GGTCGCACGG CACCAGTGGT GTTAGAAATT GGTTTTGGTA TGGGCAAATC ATTGGTCACT
ATGGCAAAAA ATGAGCCCGA CAAGGATTTT ATCGGCATTG AAGTGCATCG CCCGGGTATT
GGTGCATGTT TGGCTGACGC CCAAGAGCAA GGTGTCACCA ATTTGCGTGT TTATGAACAT
GATGCTGTTG AAGTCTTGGC TGATTGTATT GCTGATGGCA GCTTAAGCCG CATGCAGTTG
TTCTTTCCAG ATCCTTGGCA CAAAAAGCGT CACCACAAAC GCCGTATTGT TCAGCCTGAG
TTTGTTGAAA AATTACGCGG TAAATTAGCG ATTGGCGGTG TCTTTCACAT GGCGACAGAC
TGGGAAAACT ACGCAGAGCA TATGCTAGAA ATCATGGCGG TCGCGCCGGG TTATAAGAAC
TTGTCTTCTA CCAGTGATTA TGTGCCACGC CCAGAGCAAC GGCCGTTGAC TAAGTTTGAA
CAGCGCGGCC ATCGTTTAGG TCATGGTGTG TGGGATTTGA TGTTTGAGAG AGTCGCATAA
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| Protein sequence | MSQFKSKEEA AESGVYIRKI QSFVKREGRL TKGQEKAIES NWETMGLEHK SGLLDMNEVF
GRTAPVVLEI GFGMGKSLVT MAKNEPDKDF IGIEVHRPGI GACLADAQEQ GVTNLRVYEH
DAVEVLADCI ADGSLSRMQL FFPDPWHKKR HHKRRIVQPE FVEKLRGKLA IGGVFHMATD
WENYAEHMLE IMAVAPGYKN LSSTSDYVPR PEQRPLTKFE QRGHRLGHGV WDLMFERVA
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