| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0066 |
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| Symbol | |
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| ID | 4171900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 76790 |
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| End bp | 77368 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053064 |
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| Product | chorismate lyase |
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| Protein accession | YP_659652 |
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| Protein GI | 109896397 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.540538 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAAAGA CTATCTCACA TGCTTTCCCT TTAGGCGACG TTACTTGGAG TAATCAAGGG
CGGTTGTCGA TCCCTAATGC TCATTTAGAA AGTTGGCTAC TGAATACAGG CTCATTAACG
CAACGCCTGC AAACGCGTTG TAACGACTTC AAAGTGCAGC TTGTTAGCCA GCGTCAGGAG
TTAGCGACAC CTGCAGAGTA TATTCAGCTC GGCGTTTCTA AAATGTCTCA ACAAAAAGAG
AACTGGCAGG TCCGAGAGGT TATTTTACAT GGAGATAATC AACCGTGGGT ATTTGCCCGC
TCGATTATTC CTCAAGCTTT GTGTGAGGCT GACTTTTTAG AGCTCGGTGA TAAACCTTTG
GGGCATTTAA TTTTTAATGA CGATCGCTTT AAGCGTCAGC CTTTTCAATT AATGTGCTTA
CAACCGGACG AAGCCTTTTT ACACGAATAC GGTTTGCCGC CATTAACGGA GATTTGGGGG
CGGCGCTCGG TGTTTTGCTA CCAACAATAT GCCATGATGG TTGCTGAATT GTTTTTACCT
AAGGCTCCGG CATACAGAGA TTCAAATTTT GACCGATAA
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| Protein sequence | MQKTISHAFP LGDVTWSNQG RLSIPNAHLE SWLLNTGSLT QRLQTRCNDF KVQLVSQRQE
LATPAEYIQL GVSKMSQQKE NWQVREVILH GDNQPWVFAR SIIPQALCEA DFLELGDKPL
GHLIFNDDRF KRQPFQLMCL QPDEAFLHEY GLPPLTEIWG RRSVFCYQQY AMMVAELFLP
KAPAYRDSNF DR
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