| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0056 |
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| Symbol | |
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| ID | 4171890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 65951 |
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| End bp | 67027 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053054 |
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| Product | glycosyl transferase, group 1 |
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| Protein accession | YP_659642 |
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| Protein GI | 109896387 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAATG ATGTGACGAA AACCAGTAAG CAAGATGAAG TTGAGTTGAT TCTGGGAAAT
TCGAATTCCA ATTTTTCGGG TGTGACTTCA ACCATGTTGC AGGTCATGTC TTATCAACAA
AAGTTGATTA ATTTGCGTGT CATGGGTAAG CATTTTTTAC CTGATCAGAG TCAAGCTATG
ACATTCTGGC AGGTGGTGAA GATGTGTCGT AAGCCGCTGA GCAATGGTAA GTACCGTGTT
TTTCATGCTC GCCGTGTAGA TGAAATGATC CAAGCTGTGC TGTTGAAATA TGTATTCGGT
GCCAAAATAA AAATGGTCTT CAGTTCTGCT GCTCAGCGCT TTCGTTCAGG CTCTACCTTA
TGGTTAACCC GCAAAATGGA CGCTGTGGTG GCCATTAGTC AGTCATCAGC AAAGTATTTG
GCTGAGCCAC CCGATGCGAT TATTCCTCAC GGTATTCAAA TTGAGAACTT CGCCCCAGCT
CCGAACAAAG GGCAAGCATG GCAGGATTTA GGCTATGGTG GAAAATACGG TATCGGTATT
TTAGGCCGTG TGCGCAAACA AAAAGGTGTT CATCTGTTCG TCGATGCGTG CATCGAAGTG
CTGCCGAAAT ACCCGGACTA CACAGCGGTT GTAGTGGGGG CTATCTCATC TAGTCATCAA
GAATTTGTTG ATGAATTAAA AGCAAAAATC GATAAAGCAG GTTTGAGCGA GCGTATCATC
TTTACTGGTG AACTGCCGTT TGAGCGCATT CCGCCCATTT TTAGTGCTTT ATCTATGGTA
TCTGCGTTGA GCGACAATGA AGGCTTTGGT TTAACTGTAC TTGAAGCCAT GAGTTGCAGT
GCTGCGGTGT TAGCGACGCA AGCAGGCGCG TGGGAAGAGA TCATTCGCGA AGACATAGAT
GGCCACGTAG TGCCTGTGAA TGATTTACCC GCGGTGACAG CAAAAATGGA TTCACTACTA
TCAGATCCAG AAAAATTGAA ACAAAAAGGC TTAGCTGGCC GTGAACGGGT ATTGGCTCAT
TACACGGTAG AGCGGGAAGC GAAAGCCTTG GTTGATTTGT TTAAAGGGTT GCAATAG
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| Protein sequence | MENDVTKTSK QDEVELILGN SNSNFSGVTS TMLQVMSYQQ KLINLRVMGK HFLPDQSQAM
TFWQVVKMCR KPLSNGKYRV FHARRVDEMI QAVLLKYVFG AKIKMVFSSA AQRFRSGSTL
WLTRKMDAVV AISQSSAKYL AEPPDAIIPH GIQIENFAPA PNKGQAWQDL GYGGKYGIGI
LGRVRKQKGV HLFVDACIEV LPKYPDYTAV VVGAISSSHQ EFVDELKAKI DKAGLSERII
FTGELPFERI PPIFSALSMV SALSDNEGFG LTVLEAMSCS AAVLATQAGA WEEIIREDID
GHVVPVNDLP AVTAKMDSLL SDPEKLKQKG LAGRERVLAH YTVEREAKAL VDLFKGLQ
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