| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0051 |
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| Symbol | |
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| ID | 4171885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 60939 |
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| End bp | 61751 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053049 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_659637 |
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| Protein GI | 109896382 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAAT TACCCGAAGT TGAAGTGAGC CGTTTAGGCA TTAGCCCACA CTTAATTGGT
CAGCATATTG AGCAGATTAT TGTGCGTCAT AAACAATTAC GTTGGTGGGT GCCTGATGAC
GTGCATTTAG CTGAGGGGCA CAAGGTGAAT GACGTGCGTC GTCGCGCCAA GTACCTATTT
ATTGATACCG ATGCAGGTAG CATTATTTTG CATTTGGGTA TGTCGGGTAA ATTACGGATT
GTGAACAGTG AAACACCGGT GATTAAACAT GATCATATCG ATATCGTATT GACCAATGGT
GTGTGTTTGC GTTTCAACGA CGCTCGTCGC TTTGGCGCTT GTTTATGGCA ACGTGTCGGC
GACCCTGAAA TTGGTATGAT AGCCGCTCTT GGGCCTGAGC CATTAACATC TGACTTTGAT
GGACAACGCT TATATGATCT TTCTCGCACC AAGAATGTGC CAGTGAAGAA CTTTATCATG
GACAACAAAG TCGTGGTCGG CGTTGGGAAT ATCTACGCCA ATGAGTCGTT ATTCATTGCT
GGTATTGACC CACGCAAAGC AGCTAAAAAA GTCAGCAAAA AAAGTTATTT AGCGTTAGGT
GACATTATTA AGCAAGTACT CGCAAAAGCG ATAGAGCAGG GCGGTACAAC GTTAAAAGAC
TTTACCCAAG CAGATGGCAA CCCAGGCTAT TTTGCACAGC ACCTGCGCGT ATATGGGCGT
AAAGGCCAAG CGTGCGAAGT CTGCGAGAGC GAAATTCAGT CAGTGACCCT AGGGCAGCGT
AATACGTTTT TTTGTGAGCA GTGCCAAAAA TAG
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| Protein sequence | MPELPEVEVS RLGISPHLIG QHIEQIIVRH KQLRWWVPDD VHLAEGHKVN DVRRRAKYLF
IDTDAGSIIL HLGMSGKLRI VNSETPVIKH DHIDIVLTNG VCLRFNDARR FGACLWQRVG
DPEIGMIAAL GPEPLTSDFD GQRLYDLSRT KNVPVKNFIM DNKVVVGVGN IYANESLFIA
GIDPRKAAKK VSKKSYLALG DIIKQVLAKA IEQGGTTLKD FTQADGNPGY FAQHLRVYGR
KGQACEVCES EIQSVTLGQR NTFFCEQCQK
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