Gene Patl_0044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0044 
SymbolslmA 
ID4172889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp56015 
End bp56608 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content44% 
IMG OID638053042 
Productnucleoid occlusion protein 
Protein accessionYP_659630 
Protein GI109896375 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00442405 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATAG CAAAAAAGAT AAATCGCCGT GCGCAAATAT TACAAGCACT TGCCAGTATG 
CTGCAAACCA ACCCAGGCCA GCGGATCACT ACCGCTAAAT TAGCGGCTCA TGTTGGTGTG 
TCAGAAGCCG CGCTGTACCG TCACTTTCCC AGCAAAGCCC GCATGTTTGA GGGCTTAATA 
GAGTTTATTG AAGAGACTCT TTTTTCGCGT ATTAATAAAA TTATTAATGA AGAAAAAGAT 
TCCACGACTC GCTGCCAACT TATTCTGCGC CTTATACTTG GCTTTGCGGA GAAAAACCCG 
GGGATCACAC GCATCTTAAA CGGTGACGCT TTAATGGGCG AGCAAGATCG ATTGCGTGAC 
CGAATAGCCC AATTATTTGA ACGTTTAGAA ACCCAGTTAA AACAAGTTCT CAGAGAAAGA 
AAATTACGCG AAGGTAAATC ACTTCCCGCT GAAGAGGCCA TAATCGCGAA TTTCCTTATT 
TGCTATGTAG ATGGGCGAAT TAATCTGTTT ATTCGCAGTA AATTTACCCG CCGCCCAACA 
GAGGGTTTCA ACGACCAATG GCAGTTAATT AGCACTCAGT TCTTTTTGAA CTAG
 
Protein sequence
MAIAKKINRR AQILQALASM LQTNPGQRIT TAKLAAHVGV SEAALYRHFP SKARMFEGLI 
EFIEETLFSR INKIINEEKD STTRCQLILR LILGFAEKNP GITRILNGDA LMGEQDRLRD 
RIAQLFERLE TQLKQVLRER KLREGKSLPA EEAIIANFLI CYVDGRINLF IRSKFTRRPT 
EGFNDQWQLI STQFFLN