| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0043 |
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| Symbol | |
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| ID | 4172888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 54077 |
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| End bp | 55933 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053041 |
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| Product | hypothetical protein |
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| Protein accession | YP_659629 |
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| Protein GI | 109896374 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0062992 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTAT CTATCATCGC CCTTTCGCTT GCGGCTGCGT CTTTGTCGTT TGCGGCATTG
AACGTACAAG CCCGCCAGGA TAATGAATCC ACCACCCATA CAGTCGACAC CGCGCAAACG
GAATCACAAC GATTAGCCGA CTTTTTTGCT AATAACTTTA AACAGCGACT GCATCGTTCA
CCGCAGTTTC AAAGCTATTT AGGTTACAAG TGGGATTACG ATAAGTGGAA CAACATCAGT
GAAACATTCA TTGAACAAAG CAGCGAACTC GCCAAGAAGC AGTTAAATAC GTTAAAAGGT
TTTGATGAAA GTCAGTTAAG CGCCGCAGAG AAAATCAGTT TAGCGCTCAA TAAAGTGTCC
TTAGAGCGCC AACTAGCTAA TGATGAGTTT CGTCATCACA CTTATATCAT GGATCAGTTT
AGTGCTTACC ACACTATGGT CCCCAGCTTT TTGATTAATG TGCACAGAGT GACCAACACG
GAAGACGCTC AAGCCTACAT CAGTCGTCTG CAAGGGGTAA AAACCTTGTT TTCACAAGTC
ATTGACCAGC TACGTATTCG ACAAAAAATA GGCGTATTTC CACCAAAATG GTCTTACGAT
CAGATGCTAC AAGCATCAAA AAACGTGATT ACCGGAGCCC CCTTTGATAG CAGCGACAGT
ACATCAAGCA TCTGGCAGGA CTTCCAAGAC AAAGTCAGCA AGTTAGAGTT AACCGACAGC
GAGCGTAAGA CCTTACTTGA TGATGCTAGC AACGCCCTTC TGACGTCGGT TCAACCTGCG
TATCAAGCAC TCATTCGCGA GTTGAAAGTG CAGCGAGATT TAACCCCAGA AGGTGATGGT
GTATGGCGCT TGCCTGACGG CGACAAGTGG TACGAAAATC GTCTTGCATG GTTTACTACT
ACTGATTTAA GCGCCGATGA AGTGCACAAC ATTGGCTTAC AAAACGTTGA GCGTATTCAT
CAAGATATGC GCAGCATCAT GAAAAAAGTG AAGTTTGACG GCAGTTTGAA TGAATTTTTC
GAATTTATGC GAACTGACAA ACAATTCTAC TACGCCAATA CGGACGAAGG GCGTGATGCT
TACTTGCTTG AAGCGAAAGC GCTTATTGAC ACCATGCGTG ACAAACTACC TGAATATTTT
AGCTTAATTC CACAGGCTGA GATGGTGGTT AAACGTGTTG AGCCGTTTCG TGAAAAGTCA
GCCGGCAAAG CGTTTTATCA AAGCCCTGCG AAAGATGGCT CTCGACCAGG CATATACTAC
GCAAACCTTT ACGACATGAA CGACATGCCT ACCTATCAAA TGGAAGCCTT GGCCTATCAT
GAAGGTATAC CTGGGCATCA TATGCAACGA GCGATCGCTC AAGAGCTTGA GGGTATTCCT
GAGTTTCAAA AATACAGTTC ATTTACTGCC TATACCGAAG GGTGGGGCCT GTATACTGAA
GAACTAGCCA AAGATATGGG TTTTTACCAA GACCCATACT CTGACTTTGG TCGCTTGGCG
ATGGAGCTAT GGCGTGCTTG TCGATTGGTG GTTGATACCG GTATTCACAG TAAAAAGTGG
AGTCGTGAGC AAGCTATTAA TTATCTCATC GAAAATACAC CAAACCCGAA GAATGACTCG
GTTAAAGCGA TTGAGCGTTA CATTGCTATG CCGGGCCAAG CGACGGCATA TATGATTGGT
AAGTTGAAGA TCATGGAATT GCGTGCATGG TCGCAAGCAG AACTCGGTGA GCAATTCGAT
ATTCGTGGCT TTCATGCCCA AGTGCTAAAA GATGGCCCTG TGCCACTGAA TATTCTTGAA
CAGAAAGTCA AAGCTTGGGT AGCGGATGTG CAGCAATCTG CGAATAAAGC GGGTTAA
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| Protein sequence | MKLSIIALSL AAASLSFAAL NVQARQDNES TTHTVDTAQT ESQRLADFFA NNFKQRLHRS
PQFQSYLGYK WDYDKWNNIS ETFIEQSSEL AKKQLNTLKG FDESQLSAAE KISLALNKVS
LERQLANDEF RHHTYIMDQF SAYHTMVPSF LINVHRVTNT EDAQAYISRL QGVKTLFSQV
IDQLRIRQKI GVFPPKWSYD QMLQASKNVI TGAPFDSSDS TSSIWQDFQD KVSKLELTDS
ERKTLLDDAS NALLTSVQPA YQALIRELKV QRDLTPEGDG VWRLPDGDKW YENRLAWFTT
TDLSADEVHN IGLQNVERIH QDMRSIMKKV KFDGSLNEFF EFMRTDKQFY YANTDEGRDA
YLLEAKALID TMRDKLPEYF SLIPQAEMVV KRVEPFREKS AGKAFYQSPA KDGSRPGIYY
ANLYDMNDMP TYQMEALAYH EGIPGHHMQR AIAQELEGIP EFQKYSSFTA YTEGWGLYTE
ELAKDMGFYQ DPYSDFGRLA MELWRACRLV VDTGIHSKKW SREQAINYLI ENTPNPKNDS
VKAIERYIAM PGQATAYMIG KLKIMELRAW SQAELGEQFD IRGFHAQVLK DGPVPLNILE
QKVKAWVADV QQSANKAG
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