| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0027 |
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| Symbol | |
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| ID | 4173572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 30779 |
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| End bp | 31339 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053021 |
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| Product | DNA topoisomerase, type IA, Zn finger |
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| Protein accession | YP_659614 |
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| Protein GI | 109896359 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTAAAA TTGATCATTC TCTTTTCAGC ACTCATGAAT CCGCGTTTGA CCCCGGACCC
TGTCCGGTTT GCAATGCGCC ATTGCAACTT CGACATAGTA AAAATGGTGC GTTTATCGGC
TGTAGTGATT ACCCAAAATG TGAGTACAGC AAACCACTTC ATGATAGCGA CAATACTGAA
TTAACCGTTA TTGAAGGCTC CCACTGTCCT GAATGCGAGT CCGAGTTGGT GATTAGAAAA
GGGCGCTACG GTATGTATAT CGCTTGCAGC AATTTTCCTG AATGCCACTA CGTAAAATCA
AATAAAACTC AAGACACAGA TAAGGTCGAA TGCCCCTCTT GCCATAAAGG GCACCTAACA
AAGAGGGCCA ATAAATATGG GAAGAACTTC TATCCCTGTG ACCAGTATCC TCAATGTCAC
TACGCACTGA ATTTTACACC AGTCGCCCAT GCGTGCCCCA AATGCGCTTG GCCTGTTATG
CAGGAGAAAA AAGCAGCGGC AGGACTTATT TGGCAGTGCC CCGAGCGTAA ATGTGGGTAC
AAGCAGCCTG CGCAGGAATG A
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| Protein sequence | MFKIDHSLFS THESAFDPGP CPVCNAPLQL RHSKNGAFIG CSDYPKCEYS KPLHDSDNTE
LTVIEGSHCP ECESELVIRK GRYGMYIACS NFPECHYVKS NKTQDTDKVE CPSCHKGHLT
KRANKYGKNF YPCDQYPQCH YALNFTPVAH ACPKCAWPVM QEKKAAAGLI WQCPERKCGY
KQPAQE
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