Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0026 |
Symbol | |
ID | 4173571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 30246 |
End bp | 30722 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638053020 |
Product | hypothetical protein |
Protein accession | YP_659613 |
Protein GI | 109896358 |
COG category | [S] Function unknown |
COG ID | [COG2922] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGATA TCCTCATGTA TCTTTTTGAA AATTTCATTC ACAGCGAAAC AGAAATTCGC GTCGATCAAG ATGAATTGAC CGACGAACTG GTGCGCGCCG GTTTTCATCA AGATGAAATA TACAAAGCAT TATCTTGGCT CGAAAAACTA GCGGCTTTAC AAGAAACTGA CATAAACCCT TATTTAGTGA AAGGGCCTAC TTCTTTTGTT ACACGTATTT ATACGCATGA AGAAGAGATG CGCCTCGATA TCGAGTGCCG TGGCTTTCTC ATGTTTTTAG AGCAAATTAA TGTACTGGAC TCTACAACGC GTGAGATGGT TATTGATCGC GTCATGGAAA TCGACTCTAA AGAATTCTGT TTAGAGGACA TGAAGTGGGT TGTGCTTATG GTGCTGTTCA ACGTGCCGGG TAAAGAAAAT GCTTATGCAC AAATGGAAGA TTTATTATTT GAAGAGCCAG AAGGGCCGTT GCATTAA
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Protein sequence | MFDILMYLFE NFIHSETEIR VDQDELTDEL VRAGFHQDEI YKALSWLEKL AALQETDINP YLVKGPTSFV TRIYTHEEEM RLDIECRGFL MFLEQINVLD STTREMVIDR VMEIDSKEFC LEDMKWVVLM VLFNVPGKEN AYAQMEDLLF EEPEGPLH
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