| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0025 |
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| Symbol | |
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| ID | 4173570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 29105 |
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| End bp | 30244 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638053019 |
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| Product | DNA protecting protein DprA |
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| Protein accession | YP_659612 |
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| Protein GI | 109896357 |
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| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
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| TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCAAG AAAACGAACA TGCCTATCGT GAAACATCTG AGAGTGAGCA GCGCCAGTGG
CTAATACTAG CCCAGCTACC ACGATTTTCT GTTGCTAAAC TGGCAACAAT ACTGCGCAAG
AACGCTATAC AAGTAGCGGA TTTATTTAAC GCTAATCCAA AGCAACTAGC TGCCTACGGC
TTCACCGATG GGCAAATACA GCAATTACAG CATCCTAATG AGCGGCGATT GGACAAAAGC
TTACAGTGGT CTGAGCAAAC AAGCAGCTCA CTGCTTAACA TAACCTCGAA GCATTACCCT
AAAGTGCTAT TGCAAACGGC CAGACCACCC ATATTATTAT ATTGTCTTGG AAATAAAGAT
TTATTAAATA CTCATCAGAT AGCAATAGTA GGAAGTCGCA ATCCTTCTAT CGCTGGTAAG
CAAAACGCTC AGTATTTTGC CCAAGGTTTA TCTCAATGCG GATGGACAGT AACCAGCGGG
TTGGCATTGG GCATTGATGG TCTTGCTCAT GATGGAGTAC TTAAAGTTCA AGGCAATACT
GTTGCGGTGC TGGGGACAGG TCTAAATAAT ATTTATCCCA AGCGGCACGT TAAAATGGCT
GACAGTATAC TTGAACAAGG GGGCGCGCTT GTTTCTGAAT TTGTCCCTGA GATGCCTGCA
AAGCCTGAAA ATTTTCCCCG GCGGAATCGA ATTATCAGCG GCATGTCGTT GGGTACATTA
ATCATCGAAG CTGCGATAAA AAGCGGGTCT CTAATCACCG CACGTTATGC GCTTGAGCAA
AACAGGGACG TGTTTGCGGT GCCTGGTAAT ATAAACAACG TATTATCTAA AGGATGCCAC
TATTTAATAA AACAGGGTGC AAAGCTGGTG GAATGTGTGG GTGATATTAA CGATGAATAT
CAGCATCTGG CACTTAATTT CTTGAATATC CAGCAGAGTG AATTGCAAAA AAGCGCGAGA
CAAAGCTTGG CTTCTGACAA ATTGTTAGAT AGTGTAGATT TTGAAACCAC ACCGTTGGAT
ATAGTTGTAG AGCGATGTGG CATGCCAGTT GCTGAGGTTA TGTCTCAATT ATTAGAATAC
GAATTGCGTG GGTTAGTTGC AGCAGTCCCA GGCGGTTACC TTAAATTGGG GGAAAAATAA
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| Protein sequence | MYQENEHAYR ETSESEQRQW LILAQLPRFS VAKLATILRK NAIQVADLFN ANPKQLAAYG
FTDGQIQQLQ HPNERRLDKS LQWSEQTSSS LLNITSKHYP KVLLQTARPP ILLYCLGNKD
LLNTHQIAIV GSRNPSIAGK QNAQYFAQGL SQCGWTVTSG LALGIDGLAH DGVLKVQGNT
VAVLGTGLNN IYPKRHVKMA DSILEQGGAL VSEFVPEMPA KPENFPRRNR IISGMSLGTL
IIEAAIKSGS LITARYALEQ NRDVFAVPGN INNVLSKGCH YLIKQGAKLV ECVGDINDEY
QHLALNFLNI QQSELQKSAR QSLASDKLLD SVDFETTPLD IVVERCGMPV AEVMSQLLEY
ELRGLVAAVP GGYLKLGEK
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