| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0022 |
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| Symbol | |
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| ID | 4173567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 26296 |
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| End bp | 27243 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053016 |
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| Product | methionyl-tRNA formyltransferase |
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| Protein accession | YP_659609 |
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| Protein GI | 109896354 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
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| TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAATCAG GTCTTAAAAT TGTTTTCGCT GGTACGCCAG AGTTCGCCGC CAATCATTTA
TCCGCGCTAA TAGAATCTGA ACATCAGGTA ATCGCGGCTT ACACTCAACC TGATAGACCT
GCTGGTCGAG GGAAAAAACT GCACGCTAGC GCGGTGAAGC AGCTTGCTCA GCAGCACGAT
ATACCGGTTT ACCAACCTGC ATCACTTAAA TCAGAAGAAG CCCAACAGCA ACTTGCTGCA
TTAAATGCTG ATGTCATGGT TGTCGTCGCC TATGGCTTGA TTTTACCGCA GATTATTCTT
GATACGCCCA AGTACGGTTG CTTGAATGTA CATGGTTCAC TGTTACCCAA GTGGCGTGGT
GCGGCTCCTA TTCAAAGAGC AATATGGGCA GGTGATGCAG AAACAGGGGT CACCATCATG
CAAATGGATA AAGGTTTGGA TACAGGCGCG GTGCTAAGCG AATTACGTCT TGCGATTACC
CCTATAGATA CCAGCGCAAC CTTATATACA AAGTTAGCGG AACTTGGTCC TAAGGGATTA
TTAGAGACTT TAGCCTCTTT AGGAGACCTT ACGCCTCAGG CACAAGACAA CACATTGGCT
ACTTACGCTG AAAAGCTATC CAAACAAGAA GCTAAAATTG ATTGGACCAT GACAGCAGCT
CAGCTTGAGC GTAATGTTCG TGCATTTGAC CCTTGGCCTG TTGCGTATTT CGAAGCAAAC
GGCGCCGCTA TTAAAGTGCG TAGCGCTGAA GTGCAACAGA CGCCAATTTG CGATAACGCT
AAGCCAGGCC AAATTATTCA AGCAGATAAG CATGCAATTG GCGTACAAAC CGGTGACGGC
GTTTTGTTGA TTAAAACATT ACAGTTACCG GGTAAGAAGC CGCTGGCGAC TCAAGACATA
CTCAATGGTC ACAGTGATTG GTTTAGCGTC GGTACAATAC TTTCATGA
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| Protein sequence | MKSGLKIVFA GTPEFAANHL SALIESEHQV IAAYTQPDRP AGRGKKLHAS AVKQLAQQHD
IPVYQPASLK SEEAQQQLAA LNADVMVVVA YGLILPQIIL DTPKYGCLNV HGSLLPKWRG
AAPIQRAIWA GDAETGVTIM QMDKGLDTGA VLSELRLAIT PIDTSATLYT KLAELGPKGL
LETLASLGDL TPQAQDNTLA TYAEKLSKQE AKIDWTMTAA QLERNVRAFD PWPVAYFEAN
GAAIKVRSAE VQQTPICDNA KPGQIIQADK HAIGVQTGDG VLLIKTLQLP GKKPLATQDI
LNGHSDWFSV GTILS
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