| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0020 |
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| Symbol | trkA |
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| ID | 4173565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 23559 |
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| End bp | 24938 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053014 |
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| Product | potassium transporter peripheral membrane component |
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| Protein accession | YP_659607 |
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| Protein GI | 109896352 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.688304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAA TAATTATTGG TGCGGGCCAG GTCGGCGCAA CCCTCGCTGA AAACCTCGTG
GGTGAAATGA ACGAAATCAC TGTTATAGAT TCTCATCAAG ACACCCTTAG ACAGTTGCAA
GACCGATTAG ATTTACGTGT TATTAATGGC GTTGGCTCGC ACCCTGATGT GTTAAAAAAG
GCCGGTGCTG AAGATGCTGA TATGCTCATC GCTGTTACGA GCAGCGATGA AAGCAACATG
ATGGCCTGTC AGGTAGCTTA TAGTTTATTT AAAACCCCTA CCAAAATCGC CCGTGTTCGT
TCAGAGCAAT ACATTATTTA TCAAGAGCAA CTCTTTAAGC ATCAGGATGT CCCTGTAGAT
CACTTAATTG CTCCCGAGCA ATTAGTTACT AAGGCGATTA AACGTTTAAT TGACTATCCC
GGTGCGTTGC AAGTAGTTGA GTTCGCTGAC GGCAAAGCCA GCTTAGTGGC GGTAAAAGCC
TATTACGGGG GCCTACTAGT TGGCCATGCC CTGTCAACGT TAAAGCAGCA CATGCCGAAC
GTGGAGACTC GTGTAGCTGC AATATATCGA CGTGGCCGCC CTATCCGCCC ACTTGGCACG
ACGGTGATAG AAGCAGACGA CGAGGTTTTC TTCATCGCAG CGACTAAGCA TATTCGTGCT
GTCATGAGTG AACTACAAAA ATTAGAGTCT AGTTATAAAC GCATTATGAT TGCTGGCGGC
GGTCTGATTG GCGCTGGTTT GGCTAAATTG CTGGAACATA ATCACAACGT AAAGTTAATC
GAATACAGTC AAGAACGGGC TAAATACCTA TCTGCTCACT TAGACAAAAC CATCGTATTT
TGCGGTGATG CATCTGATCA TGAATTGCTC ACTGAAGAGA ACGTTGAACA AGTAGATGCC
TTTATCGCTG TGACTAATGA CGATGAAGCA AATATCATGT CGGCCATGCT CGCTAAACGC
TTAGGTGCTC AGAAGGCCAT GGTATTAATT CAGCGCAGTG CTTATGTAGA TTTAGTGCAA
GGAGGGGAAA TAGACATCGC CTTCTCGCCT CAACAAGCCA CCATCTCAGC TCTACTGACC
CATATACGCC GCGGGGATAT TGTCAATGTT TACTCACTTA GACGTGGTGC CGCAGAAGCA
ATTGAAGCGA TAGCGCATGG CGATCAAAAC ACGTCTAAAG TGGTGGGGCG TGAAATTCGC
GACATCAAAT TACCGCCAGG CACGACAATT GGCGCCATAG TCAGAGCTGA CGAAGTAATT
ATTGCCCACA GTAATACGAA AATTGAAGCT AACGATCACG TGATCTTATT TTTGGTCGAC
AAAAAGTTTA TTAGCCATGT TGAGAAACTG TTTCAACCCA GTGCTTTCTT CTTTGGGTAA
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| Protein sequence | MKIIIIGAGQ VGATLAENLV GEMNEITVID SHQDTLRQLQ DRLDLRVING VGSHPDVLKK
AGAEDADMLI AVTSSDESNM MACQVAYSLF KTPTKIARVR SEQYIIYQEQ LFKHQDVPVD
HLIAPEQLVT KAIKRLIDYP GALQVVEFAD GKASLVAVKA YYGGLLVGHA LSTLKQHMPN
VETRVAAIYR RGRPIRPLGT TVIEADDEVF FIAATKHIRA VMSELQKLES SYKRIMIAGG
GLIGAGLAKL LEHNHNVKLI EYSQERAKYL SAHLDKTIVF CGDASDHELL TEENVEQVDA
FIAVTNDDEA NIMSAMLAKR LGAQKAMVLI QRSAYVDLVQ GGEIDIAFSP QQATISALLT
HIRRGDIVNV YSLRRGAAEA IEAIAHGDQN TSKVVGREIR DIKLPPGTTI GAIVRADEVI
IAHSNTKIEA NDHVILFLVD KKFISHVEKL FQPSAFFFG
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