Gene Patl_0019 details

Gene Information

• Locus tag: Patl_0019
• ID: 4171844
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: -
• Start bp: 22918
• End bp: 23454
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 638053013
• Product: hypothetical protein
• Protein accession: YP_659606
• Protein GI: 109896351

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.065898
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAC TAAGTATCGT ACTTACAGTC GCAGCACTCA GTATTCAGCC ACAGGCACAC 
GCAGAAGGCT GGTTAGATTC AATTAAAAGC ATGCTAGGTA TGGAAACACA GCAAGAAGCT 
GCCACGCCTT CTATCTCTGG CATGGTCTCC TCTGTAACTG ATTCTCTTGG CGTTACACAA 
ACTCAAGCCT CTGGCGGTTT AGGCGCAATA TTTAATTATG CCAAAGAAAA TATCTCTTCA 
GATCAATACG GCCAACTGAC CGATGCTCTA CCTGGCGTAA GCGGTTTATT GGAATCAGTA 
CCTGATATTA GCAATATGAC GAGTGAAGGC GGTTTAGGAG GCATTTTAGA TAAAGCTGCA 
AGCTATAATG AATCACTAAA AGCTATTAAT GATGTGAAAA AGCAATTTGA AGCATTGGGC 
TTGAAACCTG AAATGATTAC GCAATTTGTT AGCAAAGCCC AGGCTTACTT GGATACCCCA 
GAAGGCCAGC AAGCTAAGCA ATTGCTGACT CAAGGTTTAG GTAAATTACT CGGTTAA 

 

Protein sequence

MKKLSIVLTV AALSIQPQAH AEGWLDSIKS MLGMETQQEA ATPSISGMVS SVTDSLGVTQ 
TQASGGLGAI FNYAKENISS DQYGQLTDAL PGVSGLLESV PDISNMTSEG GLGGILDKAA 
SYNESLKAIN DVKKQFEALG LKPEMITQFV SKAQAYLDTP EGQQAKQLLT QGLGKLLG