| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0016 |
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| Symbol | |
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| ID | 4171841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 19825 |
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| End bp | 21276 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053010 |
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| Product | TrkH family potassium uptake protein |
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| Protein accession | YP_659603 |
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| Protein GI | 109896348 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.81784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATACC GAACGATAAT TCGGATCTTA GGCCTACTTG TTGCGTTGTT TAGTGTGACT
ATGATCCCAC CTGCCATCAT TTCATTGTAC TTTAAAGACG GCAGTGGACT TCCGTTTTTC
CTTGCCTTTC TGCTGTGCTT AGGCACAGGC CTGATGTTTT GGTATCCAAA CCGGCTTCAT
CGCAGAGATT TGCGCGCTAA GGAAGGATTT TTAATTGTTG TACTTTTTTG GACCGTTTTA
GCAAGTTTCG GTGCGTTACC GCTGCTTCTA CTGGAACAAC CTGAAATGTC GGTTTCAGAC
GCGTTCTTTG AGGCGTTTTC AGGTCTAACG ACGACTGGGG CGACGGTGAT CCAAGGGATC
GACTATTTAC CTAAAGCGGT GCAGTTTTAC AGACAACAAC TCCAATGGTT AGGAGGGATG
GGGATCATCG TACTGGCAGT TGCTATTCTT CCTATTCTTG GCGTCGGTGG AATGCAGCTG
TACCGAGCTG AAACGCCCGG GCCAGTGAAA GATTCAAAAA TGACACCTCG CATCGCAGAT
ACTGCCAAGC ACTTGTGGTA CATCTATCTA ACGTTAACAA TTTGTTGTGG TGTGGCCTAT
TGGTTTGCTG GTATGAATTG GTTTGACGCC CTTTGTCATG CATTTTCAAC CGTGGCGATA
GGTGGCTTCT CAAATTATGA CGCAAGTATT GGTTATTTTG ACAGTCCTTG GATTAACATC
GTCTGCGTTA TATTTCTGTG GATAGCAGCG CTAAATTTCG CCCTGCATTA TGCTGCTGCT
AGTGGCAGAA CGTTAATGGG TTATTTTTAT GATCCTGAGC TACGTGCGTT CTTTTTAATT
CAGTTTGTAC TGGTCGCTGT GTATTTTTTC GTACTAATGA AATTCAGTTG GTTTGATGGT
GCAGGGATCG CCTTTGACCA AGCATTAATT CAATCTGTTT CATTCAGTAC TACCGCAGGT
TTCGCCACTA CCGACTTTTC ACATTGGCCA GCTTTTTTAC CAATTATGTT AATTTTTTCT
AGCTTCATAG GTGGGTGTGC AGGTTCAACT GGAGGCGGCC TAAAGGTTGT ACGCGTATTG
CTACTTTTCT TACAAGGTAA ACGAGAAGTC GACCGCTTGA TTCATCCCAA GGCCGTTTAT
ACCGTAAAGC TAGGAGATCG AGCCTTGCCT GATAGGGTAG TAGAAGCGGT GTGGGGATTC
TTTTCTGCAT ATGCGATGAT TTTCGTTATC ATTATGGTCT GTCTTATTGC TACTGGGATG
GATGATGTAT CCGCTTTTAC TGCGACCGCT GCAACCTTGA ATAACTTAGG CCCTGGTTTA
GGTACTGTGT CCGGTTCATT TGCTGATGTG TCTGATACAG GAAAATGGCT ACTTATTTTA
GCCATGCTAT TTGGGCGGTT AGAGGTATTT TCGCTTCTTG TACTGTTCTC GCCAACTTTT
TGGCGCAGTT AA
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| Protein sequence | MQYRTIIRIL GLLVALFSVT MIPPAIISLY FKDGSGLPFF LAFLLCLGTG LMFWYPNRLH
RRDLRAKEGF LIVVLFWTVL ASFGALPLLL LEQPEMSVSD AFFEAFSGLT TTGATVIQGI
DYLPKAVQFY RQQLQWLGGM GIIVLAVAIL PILGVGGMQL YRAETPGPVK DSKMTPRIAD
TAKHLWYIYL TLTICCGVAY WFAGMNWFDA LCHAFSTVAI GGFSNYDASI GYFDSPWINI
VCVIFLWIAA LNFALHYAAA SGRTLMGYFY DPELRAFFLI QFVLVAVYFF VLMKFSWFDG
AGIAFDQALI QSVSFSTTAG FATTDFSHWP AFLPIMLIFS SFIGGCAGST GGGLKVVRVL
LLFLQGKREV DRLIHPKAVY TVKLGDRALP DRVVEAVWGF FSAYAMIFVI IMVCLIATGM
DDVSAFTATA ATLNNLGPGL GTVSGSFADV SDTGKWLLIL AMLFGRLEVF SLLVLFSPTF
WRS
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