Gene Patl_0014 details

Gene Information

• Locus tag: Patl_0014
• Symbol: engB
• ID: 4171839
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 15261
• End bp: 15881
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 638053008
• Product: ribosome biogenesis GTP-binding protein YsxC
• Protein accession: YP_659601
• Protein GI: 109896346
• COG category: [R] General function prediction only
• COG ID: [COG0218] Predicted GTPase
• TIGRFAM ID: [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.877601
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGTCATT ATAGTCAAGC CAAGTTTAAT TTAAGCGCGC CAGATATTAG CCACCTAAGT 
GCAGACCAAG GGATTGAAGT CGCTTTTGCT GGACGTTCAA ATGCGGGTAA GTCTAGTGCG 
CTTAATCGTT TGACACGGCA AAAGAGCTTA GCCCGCACCA GTAAAACGCC GGGACGCACG 
CAATTAATTA ACGTTTTCGA TTTAGACGAA GATCGACGCT TAATTGATTT GCCGGGTTAC 
GGTTATGCAA AAGTACCAAT GGCCATCAAA CTGAAGTGGC AGAAATCTTT AGGGGAATAC 
CTACAAAAAC GCGAAAGCCT AAAAGGACTT GTTGTATTAA TGGACATTCG TCACCCTTTC 
AAAGATTTAG ACCAAGAGTT GATTCAATGG GCTGTCGCAG CAGATTTGCC AGTGTTAGGT 
TTACTCACTA AAGCGGATAA ACTCAAATCA GGTAAGCGTA AAGCACAGCT GCTGATGGCG 
AGAGAAGCCT CTCTTGCTTT TTGTGGTGAT GTGACGATCC ATCTGTTTTC GTCATTAAAC 
GGATTAGGCT TAGATAACTG TGAACGAGTG CTAGATAAGT GGTTTGGATA TGCTCAAGAT 
GAAGAGCTAG AGCAAGAATA A 

 

Protein sequence

MSHYSQAKFN LSAPDISHLS ADQGIEVAFA GRSNAGKSSA LNRLTRQKSL ARTSKTPGRT 
QLINVFDLDE DRRLIDLPGY GYAKVPMAIK LKWQKSLGEY LQKRESLKGL VVLMDIRHPF 
KDLDQELIQW AVAADLPVLG LLTKADKLKS GKRKAQLLMA REASLAFCGD VTIHLFSSLN 
GLGLDNCERV LDKWFGYAQD EELEQE