Gene Patl_0013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0013 
Symbol 
ID4171838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp14429 
End bp15118 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content42% 
IMG OID638053007 
Productcytochrome c, class I 
Protein accessionYP_659600 
Protein GI109896345 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.741785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTAAAA TACGCAGTTA CTATTCTGAT AATGGTCAAT TAATCAGCAG CTTAATGAGA 
AAGAATATGA AAATGATGGG TTTGTTAGTT AGCGTTTTTT TAGGTTTATC TGCTAGTGCA 
ATGGCAGCCG GTGATGTTGA AGCAGGTAAA ACGAAGTCTG CTTCTTGTGG TGCTTGTCAT 
GGTGCTGACG GAAACAGCAT GATTGATATG AACCCCAAAT TAGCCGGTCA ACATGCTGGT 
TATCTTGTTA AACAGTTAAA AGAATTTAAA CTTGCTTCAC AAACAGGTGG TGAAGAAGGA 
CGCAATAATG CCGTGATGAA TGGCATGGCT GGTGTGCTGT CTGAGCAGGA CATGCTAGAT 
ATTGCCGCTT ATTTTGAAAG CCAAACACCT TCTGAAGGCG AAACGCCTGA AGATGCGATT 
GCCGCAGGCA GTAAACTCTA TCGCGGTGGT GATTTAGATC GTGGTATTAC TGCATGCACA 
GCATGTCATG GTCCTAGAGG TAATGGTACC AGCTTATCAG GGTTCCCTGA TATTAGTGGA 
CAACACACAA CGTACCTTAA AGCCCAATTA GAAGCTTTTA GATCAGGTCA ACGTGCTAAC 
TCACATAACG GCATGATGGA GGACATAGCG AAACGCTTAA CCGACCAAGA TATTGACGTG 
TTGTCTAAAT ATATTTCAGG CCTTTATTAG
 
Protein sequence
MCKIRSYYSD NGQLISSLMR KNMKMMGLLV SVFLGLSASA MAAGDVEAGK TKSASCGACH 
GADGNSMIDM NPKLAGQHAG YLVKQLKEFK LASQTGGEEG RNNAVMNGMA GVLSEQDMLD 
IAAYFESQTP SEGETPEDAI AAGSKLYRGG DLDRGITACT ACHGPRGNGT SLSGFPDISG 
QHTTYLKAQL EAFRSGQRAN SHNGMMEDIA KRLTDQDIDV LSKYISGLY