| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0001 |
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| Symbol | |
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| ID | 4171826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 96 |
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| End bp | 1520 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638052995 |
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| Product | chromosomal replication initiator protein DnaA |
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| Protein accession | YP_659588 |
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| Protein GI | 109896333 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00208216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTAT GGAATCGTTG TCTTGAAAGG CTTCAGCAAG ATTTGCCGAC CCAGCAATTT
AGTATGTGGA TAAGACCTTT GGTAGCGAAT GAAGAGGCTG CTGCAGTGAC TCTTTTTGCC
CCTAATCGAT TCGTTTTAGA TTGGGTACGT GATAAATACA TAGCTCAAAT TGAAGCATTA
TTCGCTGAGT TTTGTGCCAA TGATGCAGTA CCTCAACTTA GAATAGAGGT AAAATCTGCT
GCCAGCGTAC AACAAAGTTA TTCGCAAAAT CCTGCTCCTG CCATTCATCA ATCCTCAGCA
GTAGAAAACA GCATTAAATC TTTACAAAAG CATCAAGCCG CTCGAAGTAA CGTTAACGTC
CAGGCAGATA ATAGCCCGCC TAACGTTAAA ATTGCGGCGT CTCATAAAAG CAATATCAAT
TTTAATTACA AGTTTGATAA CTTCGTAGAA GGTAAATCAA ACCAGTTAGC AAGAGCCGCT
TCTAAGCAAG TTTCTGATAA TCCAGGCAAG GCATATAATC CATTATTTAT TTATGGTGGC
ACCGGTTTAG GTAAAACACA CTTATTACAC GCCGTCGGTA ATGGGATTAT CGATAACAAA
AAAGACGCAA CTGTCGTTTA TATGCACTCC GAGCGATTTG TTCAAGATAT GGTTAAAGCG
TTGCAGAACA ACGCGATTGA AGAGTTCAAA CGTTATTACC GTTCGGTTGA CGCACTACTG
ATCGATGATA TTCAATTCTT TGCTAATAAA GAGCGGTCAC AAGAAGAGTT TTTTCATACC
TTCAATGCTT TGTTAGAGGG TAATCAGCAA ATCATCCTGA CTTCTGACCG TTACCCTAAA
GAAATTGATG GGGTAGAGGA CAGGCTTAAA TCTCGGTTCG GTTGGGGACT CACAATTGCT
ATTGAACCCC CAGAATTGGA AACTCGGGTT GCCATTTTAA TGCGTAAGGC GTTAGAGAAT
AAAATTGTGT TGCCAGATGA GGTGGCTTTC TTTATTGCTA AACGACTTCG ATCTAATGTG
AGAGAGCTTG AAGGGGCGCT TAACCGAGTC ATCGCTAATG CTAATTTTAC CGGCCGACCT
ATCACTATTG ATTTTGTTCG TGAAGCGTTA CGTGATTTGT TAGCGTTACA AGAAAAACTC
GTCACGATAG ATAATATTCA AAAAACGGTG GCTGAGTATT ACAAAATCAA GATGGCGGAT
ATTTTATCTA AGCGCAGAAG TAGAAGTGTG GCTCGGCCAA GGCAAATGGC CATGGCTTTG
TCGAAAGAGT TAACTAACCA CAGCTTGCCA GAAATAGGCG ATGCTTTTGG CGGTAGGGAC
CACACAACTG TGTTGCATGC ATGTAGGAAA ATTGTGCAGC TTAGAGAAGA GAGTCATGAT
ATAAAAGAAG ACTATCAAAA TTTAATTCGC ACCTTATCTT CATAA
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| Protein sequence | MSLWNRCLER LQQDLPTQQF SMWIRPLVAN EEAAAVTLFA PNRFVLDWVR DKYIAQIEAL
FAEFCANDAV PQLRIEVKSA ASVQQSYSQN PAPAIHQSSA VENSIKSLQK HQAARSNVNV
QADNSPPNVK IAASHKSNIN FNYKFDNFVE GKSNQLARAA SKQVSDNPGK AYNPLFIYGG
TGLGKTHLLH AVGNGIIDNK KDATVVYMHS ERFVQDMVKA LQNNAIEEFK RYYRSVDALL
IDDIQFFANK ERSQEEFFHT FNALLEGNQQ IILTSDRYPK EIDGVEDRLK SRFGWGLTIA
IEPPELETRV AILMRKALEN KIVLPDEVAF FIAKRLRSNV RELEGALNRV IANANFTGRP
ITIDFVREAL RDLLALQEKL VTIDNIQKTV AEYYKIKMAD ILSKRRSRSV ARPRQMAMAL
SKELTNHSLP EIGDAFGGRD HTTVLHACRK IVQLREESHD IKEDYQNLIR TLSS
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