Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_3205 |
Symbol | |
ID | 4115002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 3217642 |
End bp | 3217977 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638037970 |
Product | tetratricopeptide TPR_2 |
Protein accession | YP_645922 |
Protein GI | 108805985 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGTCCT CGCGGGCCGA GATGTTCAGG CGGCTTCTCG AGAGGGACCC GGACAACCCG ATGGTGCTGT ACTCCCTGGG CTCCGAGCTG TTCCGGCGGG GGGAGTTCGG GGAGGCGGCG GACCTTTTGC GCCGCGCCGT GCGGAGCAAG CCGGACTACT CGGTGGCCTA CCGGACGCTG GGCCGCGCGC TCTACGAGCT CGGCGAGGAC GAGGAGGCGC GGCGGGTCTT CGAGGAGGGG CGCGAGGTGG CCCGGAAGAA CGGCGACCTG CAGACCGTAA AGGAGATAGA CGTCTTTGTG CGCCGGCTGG AGAAGCGGGC CGCGGGCGGC CGGTAG
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Protein sequence | MESSRAEMFR RLLERDPDNP MVLYSLGSEL FRRGEFGEAA DLLRRAVRSK PDYSVAYRTL GRALYELGED EEARRVFEEG REVARKNGDL QTVKEIDVFV RRLEKRAAGG R
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