Gene Rxyl_3205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_3205 
Symbol 
ID4115002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp3217642 
End bp3217977 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content71% 
IMG OID638037970 
Producttetratricopeptide TPR_2 
Protein accessionYP_645922 
Protein GI108805985 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTCCT CGCGGGCCGA GATGTTCAGG CGGCTTCTCG AGAGGGACCC GGACAACCCG 
ATGGTGCTGT ACTCCCTGGG CTCCGAGCTG TTCCGGCGGG GGGAGTTCGG GGAGGCGGCG
GACCTTTTGC GCCGCGCCGT GCGGAGCAAG CCGGACTACT CGGTGGCCTA CCGGACGCTG
GGCCGCGCGC TCTACGAGCT CGGCGAGGAC GAGGAGGCGC GGCGGGTCTT CGAGGAGGGG
CGCGAGGTGG CCCGGAAGAA CGGCGACCTG CAGACCGTAA AGGAGATAGA CGTCTTTGTG
CGCCGGCTGG AGAAGCGGGC CGCGGGCGGC CGGTAG
 
Protein sequence
MESSRAEMFR RLLERDPDNP MVLYSLGSEL FRRGEFGEAA DLLRRAVRSK PDYSVAYRTL 
GRALYELGED EEARRVFEEG REVARKNGDL QTVKEIDVFV RRLEKRAAGG R