Gene Rxyl_3197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_3197 
Symbol 
ID4114994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp3209297 
End bp3210739 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content64% 
IMG OID638037962 
Productethanolamine permease 
Protein accessionYP_645914 
Protein GI108805977 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0833] Amino acid transporters 
TIGRFAM ID[TIGR00908] ethanolamine permease 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCAGGG GTGAGAGACG AGGCGTCCAG GGCGTGGAGT ACGAGCACGT CGGGGCCGAG 
TATCTGGAGC GGCGCCAGCT CAAGAAAGGA GCGGCCGGGT GGGTGCTTCT TGCGGGGCTT
GGCGTGGCCT ACGTGATCTC CGGGGATTTC GCCGGCTGGA ACTTCGGGCT TGCGCAGGGC
GGTTGGGGAG GTCTGCTGAT CGCCACGCTT CTCATGGCCA CTATGTACAC CACCATGGTG
CTTGCGCTGG CCGAGCTCTC CTCCGCCATA CCGGTTGCAG GGGCTGGGTA CGGGTTTGCC
CGGCGGGCGA TGGGGCCTTG GGGTGGTTTC CTCACCGGGA CGGCCATACT GATCGAGTAC
GCGATCGCGC CGGCGGCCAT AGCGACCTTC ATCGGCGCCT ATGTGGAGTC GCTCGTCGGC
TTCGGGGGAC CGTTGGTCTA CCTCTTCTTC TACGCGCTGT TCGTCGGGAT ACACCTGTAT
GGGGTGGGGG AAGCGCTCAA GCTCATGTTT GCGATCACGG CCGTAGCCGC TTTGGCGCTG
GTCGTGTTCG TGATCGGCAT GATCCCACAG TTCGATGCGG CGAACCTCTT TGACATAGCT
CCGGCAGATG CGGCCGGTGC CAGCGAGTTC CTTCCCTTCG GCTACCTGGG GATCTGGGCG
GCGCTGCCCT ACGCGATCTG GTTCTTCCTC GCCATAGAAG GGGTACCCTT GGCGGCCGAA
GAGACCCGCG ATCCCGCCAC CGATATGCCA AAAGGTCTGA TCGGGGGGAT GCTTGTTCTG
CTGGTTTTCG CCGCTCTCAT ACTCATCTTT GGTCCGGGCG GAGCGGGGTC CGCGGCCATA
CAGGACTCCG GAAACCCGCT CGTGGAGGCG GTGCAGGCCG CCTACGGCGG TCCCAACCTG
CTGAGCGGCT TCATCAACGT GGTAGGGCTG GCCGGGCTCG TCGCCAGCTT TTTCTCCATA
ATCTTCGCCT ACTCGCGGCA GATCTTTGCC CTCTCCAGGG CTGGATATCT GCCGCGGTGG
CTGTCGGTCA CGAACCGGCG ACGTGTCCCG TGGGTTGCGC TCGTTGTCCC CGGGGTCATC
GGGTTTCTGC TCTCGCTCAG CGGGCAGGGA GACCTTCTCA TCCTCATAGC GGTCTTCGGG
GCCACCATCT CCTACGTGCT GATGATGCTC TCGCACATCA TTCTCCGGTA CAAGGAGCCG
GAGATGGAGA GGCCCTACAG GACGCCCGGC GGCGTTCTCA CCTCGGGGGT TGCGCTCATG
CTCGCCTGTG CTGCCGTGAT AGCCGGGTTC TTGGTGGATC CGCGGGTGCT CGTGGGCACG
GCCATCATCT ATGCCATCCT GATAGCATAT TTTGCCTTCT ACAGCAGGCA CCACCTCGTA
GCCGAGGCGC CTGAAGAGGA GTTCGAAGCC GTGCAGAGGG CGGAGGCTGA GCTGTCGGGA
TGA
 
Protein sequence
MSRGERRGVQ GVEYEHVGAE YLERRQLKKG AAGWVLLAGL GVAYVISGDF AGWNFGLAQG 
GWGGLLIATL LMATMYTTMV LALAELSSAI PVAGAGYGFA RRAMGPWGGF LTGTAILIEY
AIAPAAIATF IGAYVESLVG FGGPLVYLFF YALFVGIHLY GVGEALKLMF AITAVAALAL
VVFVIGMIPQ FDAANLFDIA PADAAGASEF LPFGYLGIWA ALPYAIWFFL AIEGVPLAAE
ETRDPATDMP KGLIGGMLVL LVFAALILIF GPGGAGSAAI QDSGNPLVEA VQAAYGGPNL
LSGFINVVGL AGLVASFFSI IFAYSRQIFA LSRAGYLPRW LSVTNRRRVP WVALVVPGVI
GFLLSLSGQG DLLILIAVFG ATISYVLMML SHIILRYKEP EMERPYRTPG GVLTSGVALM
LACAAVIAGF LVDPRVLVGT AIIYAILIAY FAFYSRHHLV AEAPEEEFEA VQRAEAELSG