Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_3191 |
Symbol | |
ID | 4114988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 3203380 |
End bp | 3203919 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638037956 |
Product | cupin 2, barrel |
Protein accession | YP_645908 |
Protein GI | 108805971 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000053457 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGGAAG CGAGGAACCT GCGGGCGCGC ATCGTGCTGT CGGGGGACGA GGGCGAGAGG GTAACCGTCG GCGGGCTTGG CGTACGGTTC ATGATCGGGG CGAAGGAGAG CGGCGGCAAC TTCGCGCTGG TCGAGCATCC GCTCGGGCCG CGGGCGCTCG GCGCTCCGGT GCACACCCAC CGGTACGAGG ACGAGTACAC CTACGTGCTG GAGGGGGAGA TCGGGGTGCA GGTCGGAGAG GAGGTGCGTG TTGCGCGGCC CGGGGATCTC GTCTTCAAGC CCAGGGGCGT GCCGCACGCC TTCTGGAACG CCAGGGACGG GCCTGCGCGG GCGCTGGAGA TCATCTCCCC CGCCGGGTTC GAGCGCTACT TCGCGGAGGT GGCGCCGCTG CTCCCTCCCG CCCACGCCGG TCCTCCCGAC GAGCGGGCGC TGGGCGAAAC AATGGCCAGG TACGGGCTGG AGATGGATCT GGGTTCCATC CCCGTGCTAG CCGAGCGCCA CGGCCTCGTG GTCGAAGGAC CGCCGCCTCC CGGGCGTTAG
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Protein sequence | MGEARNLRAR IVLSGDEGER VTVGGLGVRF MIGAKESGGN FALVEHPLGP RALGAPVHTH RYEDEYTYVL EGEIGVQVGE EVRVARPGDL VFKPRGVPHA FWNARDGPAR ALEIISPAGF ERYFAEVAPL LPPAHAGPPD ERALGETMAR YGLEMDLGSI PVLAERHGLV VEGPPPPGR
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