Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_3175 |
Symbol | |
ID | 4114973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 3186764 |
End bp | 3188161 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638037941 |
Product | succinate-semialdehyde dehydrogenase (NAD(P)+) |
Protein accession | YP_645893 |
Protein GI | 108805956 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.909574 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCTATCG CGACCGTGAA CCCGGCGACC GGCGAGGAGC TGAAGCGCTT CGAGGCCCTC GACCGGGAGC AGATAGACGA GAAGATAGAG CGCGCCGTCG GGGCCTTCCG GGGCTGGCGC GAGACCCCCG TGCAGGAGCG CTGCCGGCTC ATGGCCCGGG CCGCGGAGGT GCTGGAGGAG AGGGCGGAGG AGTTCGGCCG GCTCATCACC ACCGAGATGG GCAAGCCGCT CGCCGCCGCC GTCGCCGAGG TGCGCAAGTC CGCCCGGGGG TGCCGCTACT ACGCGCAGAA CGCCGCGCGG TTTCTCGCCG ACGAGGAGGT GGAGCTGGAG GGCGCCCGCG CCTTCGTCCG CTACCAGCCG CTGGGACCGG TGCTGGCCGT CATGCCGTGG AACTTCCCGT TCTGGCAGGT CTTCCGGTTC GCGGCCCCCG CGCTGACCGC CGGCAACGTG GGGCTCCTCA AGCACGCCTC CAACGTCCCG CAGTCGGCGC TGGCCATAGA GGAGGTCTTC CGTCAGGCCG GCTTCCCCGA GGGCGTCTTC CAGACGCTGC TCATAGGCGC CTCGCAGGTG AGGGATGTGA TCTCCGACCC GCGGGTGCGG GCCGCCACGC TCACCGGGAG CACCCCGGCC GGGCGCGACG TCGGCGGGGA GGCGGGCCGG AACATAAAGC CGAGCGTGCT GGAGCTGGGG GGGAGCGACC CGTTCATCGT GATGCCCTCG GCCGACCTGG ACCGGGCGCT GGACACCGCG GTGACCTCGC GCACCCTCAA CAACGGCCAG TCGTGCATCA ACGCCAAGCG GATCATCGTC CACCGCCAGA TCGCCGAGGA GTTCACCCGC CGCTTCGTGG AGAAGATGGC CTCGCTCAAG GTCGGGGACC CGATGGACGA GACGACGGAC ATGGGCCCGC TGGCGATGCC CTCGATCCTG GAGGGGGTGG ACGAGCAGGT CCGCAGGAGC GTGGAGGCCG GGGCGAAGGT GCTCACCGGC GGCAAGCCGC TGGACGGGCC GGGCTACTTC TACCCCCCGA CGGTGCTCGC GGAGATCCCC GAGGGTGCGC CGGCCCGGGA GGAGGAGATC TTCGGCCCCG TCGCCTCGCT TTTTACCGCC CGGGACATCG ACGAGGCGAT CCGGCTGGCC AACGAGACCC CCTTCGGGCT GGGCTCCAGC GCCTGGACTA ACGACCCGGA GGAGCAGGAG CGCTTTGTAG ATGAGATCGA GGCCGGCATG GTGTACATCA ACCGGCTGGT GGAGTCCACG CCGGAGGTGC CCTTCGGCGG GGTGAAGAGC TCGGGCTACG GGCGGGAGCT CTCCCACTTC GGCATCCGGG AGTTCGTGAA CGTCAAGACG GTGTGGATCG ACGCCTCCGG CGGGGAGCGG GGGAGGGGGG TGGAGTAG
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Protein sequence | MAIATVNPAT GEELKRFEAL DREQIDEKIE RAVGAFRGWR ETPVQERCRL MARAAEVLEE RAEEFGRLIT TEMGKPLAAA VAEVRKSARG CRYYAQNAAR FLADEEVELE GARAFVRYQP LGPVLAVMPW NFPFWQVFRF AAPALTAGNV GLLKHASNVP QSALAIEEVF RQAGFPEGVF QTLLIGASQV RDVISDPRVR AATLTGSTPA GRDVGGEAGR NIKPSVLELG GSDPFIVMPS ADLDRALDTA VTSRTLNNGQ SCINAKRIIV HRQIAEEFTR RFVEKMASLK VGDPMDETTD MGPLAMPSIL EGVDEQVRRS VEAGAKVLTG GKPLDGPGYF YPPTVLAEIP EGAPAREEEI FGPVASLFTA RDIDEAIRLA NETPFGLGSS AWTNDPEEQE RFVDEIEAGM VYINRLVEST PEVPFGGVKS SGYGRELSHF GIREFVNVKT VWIDASGGER GRGVE
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