| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_3171 |
|---|
| Symbol | |
|---|
| ID | 4114969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 3184157 |
|---|
| End bp | 3185293 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 638037937 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_645889 |
|---|
| Protein GI | 108805952 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4129] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTGGCTC TCTCTGCGGC GGTGAAGAGC GTCGAGGCCG TTGGGCTCAG GACCTTCGGC
GGGGCGCTGG AGCGGCTGCG CTACGGCGGC TGGCCGGTGG TGCAGTCGGC GGTAGCGGCG
AGCCTCGCGT GGTATCTGGC GGAGGCTCTT CTGGGGCACC AGCGGCCGTT CGTGGCCGCC
ATCGCGGCGG TGATCTCCGT CGGGGCCGTG GCCGGGCAGA CGCTGCGGCG GGCGGCGGAG
TGGATCTTCG GGGTCGCGCT GGGGCTCGCG GTCGCCGACC TCATCGTGCT CGCCATCGGG
ACGGGCGTGT TGCAGACCGG CTTTATAGTG GGCCTGGCGA TGACGGTGGC GCTCATGGTG
CGGGGCGGGG TGATGCTGGT GACCGAGGCG GGCATCTCCG CCCTGCTGGT GGCCAACCTG
GACCCCACGG CCTACGGCGT CTCCCCGGAC AGGTTCGTCG AGGCGCTGGT GGGCGGGGGC
ACGGCGCTCG CGGTGAGCGC GGTCTTCCCC AGCGACCCCA AGGCCCGGGT GGAGAGGACC
GCCGACCGCA CCCTCGTCAC GCTGGCGGCG GTGCAGCGTA GGATCTCCGC CGCCCTCTCC
GGGGGCGACC TGGGGGGCGC GGAGCGGGCG CTCGAGGAGG CCCGCGGCAT AGACGCCCGG
GTCGCCGAGC TCCGCGAGAC CCTCGACGGG GGGTACCAGA TCGCCCGCTA CTCCCCGCCG
CGCCGCAGGA CGCTGGGGCA TCTCGCCTAC TACGCCACGG CGGCGGAGCA GCTGGATCTG
GCGGTGCGCA ACACCCGCGT GCTGGCCCGC GCCGCGGTTA GCATGGTGCA GGAGCAGGGG
GCCGCGCCCC CCGCCCTGTG CGCCGCCATA GAGGATCTGG CGCGGGCGGT GGAGGCGCTC
GACGCGTACC TGGACCGGCC CGAGCACCCG CTCGACACCC GCTCCTTCGC GCTGGACGCC
GCGGCGAAGG CCACCGCGGT GCTGCGGGAG CGCAGCGACC TGGAGACCAG CGTGCTCGTC
GGCCAGATCC GCTCCACCGC CCTCGATCTG CTGCAGGCCT CCGGCATGCA CGCCCGCGAG
GCCCTCCGGG CGATGCGCGA GGTCTGCTCC GTTGCGCCCT CAGAGGGGGC GTGCTAG
|
|---|
| Protein sequence | MLALSAAVKS VEAVGLRTFG GALERLRYGG WPVVQSAVAA SLAWYLAEAL LGHQRPFVAA
IAAVISVGAV AGQTLRRAAE WIFGVALGLA VADLIVLAIG TGVLQTGFIV GLAMTVALMV
RGGVMLVTEA GISALLVANL DPTAYGVSPD RFVEALVGGG TALAVSAVFP SDPKARVERT
ADRTLVTLAA VQRRISAALS GGDLGGAERA LEEARGIDAR VAELRETLDG GYQIARYSPP
RRRTLGHLAY YATAAEQLDL AVRNTRVLAR AAVSMVQEQG AAPPALCAAI EDLARAVEAL
DAYLDRPEHP LDTRSFALDA AAKATAVLRE RSDLETSVLV GQIRSTALDL LQASGMHARE
ALRAMREVCS VAPSEGAC
|
|---|
| |