Gene Rxyl_3161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_3161 
Symbol 
ID4114960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp3173805 
End bp3175139 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content73% 
IMG OID638037928 
Producttetratricopeptide TPR_2 
Protein accessionYP_645880 
Protein GI108805943 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACACA GGGAGCTGAT CGAGCAGGGC GAGGCGCTCG CGAGCGAGGG CCTCGTGGAG 
GAGGCCCTGG AGCGCTTCGA GCAGGCGCTG CAGCGGGCCC CGGACGACCC GGAGGTGGTC
GAGGCCGTGG GCCGGGCCCT TCTCGGGCTG GGACGCCTGG AGGAGGCCGA GGCCAGCTTT
CTGGACGCGC TGGAGATGGA CCCCGGGTGG GTCGCCCCGC GGATGGGGCT GGCGATGGTG
GCGATGCGCC GGGACGAGCC CTTCAAGATC GTCCACCACC TGGAGCGGGC CATAGAGGCC
GACCCCGAGC AGCCCGACGC CTACGTGGAG CTCGGCCGCT ACTACGGGCT CATGGGGGAG
CCGCTGCTGG CCCGGGCCAC CTTCGAGCGG TGGCTGGCCC GGCACCCGGA CGACGCGGAC
ATGCTGATAA ACGCCGGGCT CACGCTCTTT GACGCCGGCG ACTACGGCCC GGCGCTGGAG
TTCTTCGAGC GGGCGGTGGA GGCGGCGGAA GACGCCGAGC AGCGCCTGGG GGCGCTCACC
TTCCGGGCGA ACGCGCTGGA CATGCTCGGC CGCTACGAGG AGGCGGTGGC CGCCTACGAA
GGGGTCATAG CCGAGGAAGC GCGGTGGTGG GAGGCCCACG CCAACCTGGG CATCTGCCAC
GCCCGGAGCG GGCGCCCGGA GGAGGCGGAG GCGGCCTTCC GGCGCGGGCT CGAGGCATGC
CCCGGCTCCC CGGAGATGCG GGACGAGCTG GCCGCCCACC TGCTGGCCTA CGGCGGCGAC
CCCCGCGAGG CGCTGGCGCT CGCCGAGGAG GCCGTGGCCC TGGGGAGCGA CGAGATCCGG
CACCTCTACA CTTTAGGCGA GGCGCGGCTG GCCAACGGCG ACGAGGAGGG GGCGATGGAC
GCCTACCGGA GGGTCCTGGA GCTGGACCCG GAGAACCCGG AGGCCCACCT GGAGCTCGGC
ATCCTCCACG ACCGGCGCGG GGAGCGGCAG CGGGCCGAGA AGCACTTCCT GGAGTCGCTC
AAAGCCGACC CCTCAAACCC CCGGGCGCTC TACTCCTACG CCAACGTCTA CTACACGTCC
GGGGAGCTGG AGACGGCCGA GGAGCTGCTG GCGCGGGCGC TCGCCGCGGA CCCGGGCTAC
TCCCCCGCCC TCTCGGCGCT CGCGAGCATC CGGGCCCGGA GGGGGGAGTA CGCCGCCTCG
CTGGAATACC TGGAGAAGGC CGTCGAGGCG GGGGAGCGCG ACGTCGAGCA CTTCAAGCGG
GCCCTGGAGT TCGCCCCCCT GAGGCAGGAC CCCCGCTTCC GGAGGCTCCT CTCGCGCATG
GCCGAGGGGG ACTGA
 
Protein sequence
MEHRELIEQG EALASEGLVE EALERFEQAL QRAPDDPEVV EAVGRALLGL GRLEEAEASF 
LDALEMDPGW VAPRMGLAMV AMRRDEPFKI VHHLERAIEA DPEQPDAYVE LGRYYGLMGE
PLLARATFER WLARHPDDAD MLINAGLTLF DAGDYGPALE FFERAVEAAE DAEQRLGALT
FRANALDMLG RYEEAVAAYE GVIAEEARWW EAHANLGICH ARSGRPEEAE AAFRRGLEAC
PGSPEMRDEL AAHLLAYGGD PREALALAEE AVALGSDEIR HLYTLGEARL ANGDEEGAMD
AYRRVLELDP ENPEAHLELG ILHDRRGERQ RAEKHFLESL KADPSNPRAL YSYANVYYTS
GELETAEELL ARALAADPGY SPALSALASI RARRGEYAAS LEYLEKAVEA GERDVEHFKR
ALEFAPLRQD PRFRRLLSRM AEGD