| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_3156 |
|---|
| Symbol | |
|---|
| ID | 4114955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 3169446 |
|---|
| End bp | 3170300 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638037923 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_645875 |
|---|
| Protein GI | 108805938 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCCGGGG AGCGCAGGAG GCCCCTTCTG GAGGGCAGGG TGGCCCTCAT CACCGGGGCG
GCGCGCGGCC AGGGGCGCTC TCATGCGCTG GCCCTGGCCC GCGAGGGGGC GGACATAGTA
GCCTGCGACC TCTGCGAGCC CCTCGCCAGC GTCCCCTACC CCCTGGGCAG CCGGGAGGAG
CTCGACCGGA CGGCCCGGAT GGTGGAGGGG CTGGGGAGGA GGGCGGTGGC TCAGAAGGCC
GACGTGCGCA GCCTGGAGCA GGTGCGCGCG GTGGTGGAGA GGGGGCTCTC GGAGCTCGGG
CGCATAGACG TCGTGTGCGC CAACGCCGGC GTGATCAGCT ACGCCCCGGC CTGGGAGATC
ACCGCGGAGC AGTGGCGCGA GACGCTCGAG ACCAACCTCA CCGGGGCCTG GCACACCTGC
AAGGCCGCAA TCCCCCACAT GATAGAGCGG GGCGGGGGCG GCTCCATCAT CCTCACCGGC
TCCACCGCGG CGGTGGTGGG CTTCGAGAAC CTCGCCCACT ACGCGGCCTC CAAGCACGGG
CTGGTCGGGC TCATGAAGAC GCTGGCCAAC GAGCTCGCGC CCCACGGCAT CCGGGTGAAC
GTCGTCCACC CCACCAGCGT CGACACCGCC ATGATCCACA ACGAGGCCAC CTACCGCCTC
TTTCTGCCCG GCGGCGACCG CGCCCCCACC CGCGAGGAGG CGGCCCGGGC CTTCCGCGCC
CTCAACGCCC TCCCCGTCCC CTGGGTGGAG CCCGAGGACG TCTCCGGTGC CGTGCTCTGG
CTCGCCTCCG ACCAGGCCCG CTACGTCACG GGCCAGCAGC TGCGGGTGGA CGCCGGGGCG
GTCGAGAAGA GGTGA
|
|---|
| Protein sequence | MAGERRRPLL EGRVALITGA ARGQGRSHAL ALAREGADIV ACDLCEPLAS VPYPLGSREE
LDRTARMVEG LGRRAVAQKA DVRSLEQVRA VVERGLSELG RIDVVCANAG VISYAPAWEI
TAEQWRETLE TNLTGAWHTC KAAIPHMIER GGGGSIILTG STAAVVGFEN LAHYAASKHG
LVGLMKTLAN ELAPHGIRVN VVHPTSVDTA MIHNEATYRL FLPGGDRAPT REEAARAFRA
LNALPVPWVE PEDVSGAVLW LASDQARYVT GQQLRVDAGA VEKR
|
|---|
| |