| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_3136 |
|---|
| Symbol | |
|---|
| ID | 4114935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 3148744 |
|---|
| End bp | 3150282 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638037903 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_645855 |
|---|
| Protein GI | 108805918 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.218269 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGTTC TGGGAGATCT CGCGAGCGGC TTCGCGGCGG CGCTGAGCCT CAAGTATCTG
CTGCTCGCGG CGCTCGGCGT CACGCTCGGC ACCATCGTGG GCGTGCTGCC CGGCATCGGG
CCCGCCCTTA CCATCGCGCT GCTCCTGCCC CTGACCTACG ACTTCGACCC CACCGGCGCC
TTCGTCATGT TCGCCGGCAT CTACTACGGC GGGATGTACG GCGGCTCCAC CACCTCCATC
CTGCTCAACA CCCCCGGGGA GTCCGCGTCC GTGGCCACAA CCCTGGAGGG GTTCCCCATG
GCGCGCGCAG GACGTGGCGG GGCCGCGCTC GCCACCGCGG CCATAGGCTC CTTCGTGGCC
GGCACCATCT CCACGGTGGC TATAACCTTC CTGGCGCCGT TGTTCGCGCA GGTGGCCACC
ACCTTCCGCC CCGCCGACTA CTTCGCGCTC ATGGTGCTCG CCTTCATGAG CGTGACCGCG
CTGGTGGGCC GCTCGCTGGT GAGCGGGCTC ACCAGCCTGT TCCTGGGGCT GTTTATGGGC
CTCATCGGGA TAGACCAGCT CAGTGGCCAG GATCGCTACA CCTTCGGCGT CCAGCAGTTG
CTCAACGGAC TCGACGTGGT GGTCGTGGCC GTGGGGCTCT TCGCCGTCGG GGAGGCCCTG
TACGTCGCAG CCAGAATGCG CCACGACACC GAGGAGATAG TGCCCGTGCG CGGCCGGATA
GGGATGACCC GCCAGGAGTG GGGCCGGTCG TGGAAGAGCT GGATCCGGGG CACCCTCATC
GGGTTCCCCT TCGGAACCCT GCCCACCGGC GGCGCGGAGA TACCTACGTT TATCAGCTAC
AATGTAGAGA AACACCTCAG CAAACACAAG GAAGAGTTCG GCAGGGGGGC CATAGAGGGG
GTCGCCGGGC CGGAGGCCGC CAACAACGCC GCCTTCTCCG GCGTGCTCGT GCCGCTCTTG
ACGCTCGGGA TACCCACCTC GGCCACGGCG GCCATCCTGC TCGCGGCCTT CCAGATCTTC
AACCTCCAGC CGGGGCCGCT GCTCTTCGAG AAGGCGCCGG ATCTGGTGTG GACCCTAATC
GCCAGCCTGT ACATCGGCAA CGTGATGCTC CTGATCCTCA ACTACCCCCT CATCCGCCTG
TGGGTGAGGC TCCTCTCCAT CCCCAGACCC CTCCTGTACT CCGGCATACT GCTGTTCGCC
ACGCTTGGCG TCTACAGCCT CGCCAACAGC TTCGTCGACC TGCTCGTCAT GTACGCTATA
GGGGTGCTGG GCTTCTTCAT GCGCCGCTAC GACTTCCCCG TAGGCCCGGT GATACTCGGC
GTTATTCTTG GGCCCCTCAT GGAGGCCCAG TTTCGCCGGG CCCTGCAGAT CAACGAGGGA
GACCCGTCCG TCTTCTTCAC CCGTCCGCTC TCCCTCGCGC TGCTCCTGCT GGCCCTCCTG
GCGCTGCTGC TGCCCTACCT CCCGCCCCTG ATCTCCCGGC TGAGGGGTGG AAGGCCGGAA
CAGGGGCGCA CCGTGTTCGG GGAGGGCAAG GAGGACTGA
|
|---|
| Protein sequence | MEVLGDLASG FAAALSLKYL LLAALGVTLG TIVGVLPGIG PALTIALLLP LTYDFDPTGA
FVMFAGIYYG GMYGGSTTSI LLNTPGESAS VATTLEGFPM ARAGRGGAAL ATAAIGSFVA
GTISTVAITF LAPLFAQVAT TFRPADYFAL MVLAFMSVTA LVGRSLVSGL TSLFLGLFMG
LIGIDQLSGQ DRYTFGVQQL LNGLDVVVVA VGLFAVGEAL YVAARMRHDT EEIVPVRGRI
GMTRQEWGRS WKSWIRGTLI GFPFGTLPTG GAEIPTFISY NVEKHLSKHK EEFGRGAIEG
VAGPEAANNA AFSGVLVPLL TLGIPTSATA AILLAAFQIF NLQPGPLLFE KAPDLVWTLI
ASLYIGNVML LILNYPLIRL WVRLLSIPRP LLYSGILLFA TLGVYSLANS FVDLLVMYAI
GVLGFFMRRY DFPVGPVILG VILGPLMEAQ FRRALQINEG DPSVFFTRPL SLALLLLALL
ALLLPYLPPL ISRLRGGRPE QGRTVFGEGK ED
|
|---|
| |