| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_3131 |
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| Symbol | |
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| ID | 4114930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 3143233 |
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| End bp | 3144795 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638037898 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_645850 |
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| Protein GI | 108805913 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.144549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATAA AGCTCTTCGA CACCACGCTG AGGGACGGCG CCCAGCGGGA GGGCGTGAGC
CTCACCGCCG AGGACAAGGC GCGCATAGCC CGCGAGCTGG ACTCTTTGGG GCTCCACTAC
ATCGAGGCGG GCTTCCCGGC CTCCAACCCC AAGGACCTGG AGTTCTTCGA GGGCTTCGAC
GCCTCGGAGC TGGAGAACGC GAGGCTCGTG GCCTTCACCC GGGCCCGGAG GCCCGGCGGG
CGGGCGGGGG ACGACCCCGC GGTGAGCCTG CTCGCCCGGC TCTCCGCTCC GGTGGCGTGC
ATCGTCGCGA AGAGCTGGCG GCTGCACGTG GAGAAGGTGC TCGGGACCAC CCCGGAGAAG
AACCTGGAGA GCGTCCGGGA CACGGTGGCC TACCTCGCCG CGGCGGGCAA GGAGGTCATC
TTCGACGCCG AGCACTACTT CGACGGCTTC CGGGAGGACC CCGAGCACGC GCTCGCGGTG
CTGCGGGCCG CCGCCGAGGC CGGGGCGACG ACGCTGGTGC TCTGCGACAC CAACGGCGGG
ACGCTCCCGA CGGAGCTAAA GGCGGTCGTG GCCCGCACCG TGCGCGAGTT CCCGGGGGTG
GAGATAGGCA TACACACCCA CAACGACGCC GGCTGCGGGG TGGCCAACGC CCTGGCGGCG
GTGGAGGCGG GGGCGACGCA CGTGCAGGGC ACGATAAACG GGGTCGGGGA GCGGTGCGGC
AACTGCGACC TGGTCACCAC CATTGCCAAC CTGCAGCTCA AGATGGGCCT TAAGGTCGTC
GAAGAGGAGC AGCTCCGGCG GCTCACGGAG GTCTCCAACT ACGTCTCGGA GATCATGAAC
ATAACCCCCG ACGCCCACCG CCCCTACGTG GGCCGCAGCG CCTTCGCCCA CAAGGGCGGG
CTGCACGTGG ACGGCATCTC GCGCGACCCG CGAACCTACG AGCACGTGGC GCCGGAGCTG
GTGGGCAACC AGCGGCGCAC CCCGGTCGGG GAGCTCTCCG GGAAGAACTC GGTGCGAGCC
AAGGCGGCGG AGCTGGGGCT CGAGGTCGAG GACGTCTCGA CGGTGCTCTC CGCGATAAAG
CGCAAGGAGC ACGAGGGCTA CCACTACGAG GCCGCCGACG CCTCGCTCGC CCTGCTCATC
CAGCGCACCA CCGGGGAGGA CGAGCCGCTC TTCGAGCTGG AGAGCCTGCG CGTCATCTCC
GAGAAGCGCG CCGGCGGCGA GGCCACCGTG GAGGCCACCA TAAAGCTCTA CATCAAGGGC
CAGCGGGTCA TCTCCACCGC CGAGGGCAAC GGCCCGGTGA ACGCCCTCGA CCGGGCGCTC
AGGCAGGCCA TAGAGCCCCA CTACCCAGAG CTCAAGGAGA TACACCTCTC CAACTACAAG
GTGCGCATCC TCGACGAGCA CCGGGCGACG GCGGCGACCA CCCGGGTTCT CATCGACTCC
ACCGACGGCA AGCGGGTGTG GGGCGCGGTG GGCGTCGGGG AGAACATCAT AGAGGCGAGC
TGGCAGGCGC TGGTGGACGG GCTGGAGTAC GGCATCAACG GGGCGAAGAA GCAGAAGGGC
TAG
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| Protein sequence | MSIKLFDTTL RDGAQREGVS LTAEDKARIA RELDSLGLHY IEAGFPASNP KDLEFFEGFD
ASELENARLV AFTRARRPGG RAGDDPAVSL LARLSAPVAC IVAKSWRLHV EKVLGTTPEK
NLESVRDTVA YLAAAGKEVI FDAEHYFDGF REDPEHALAV LRAAAEAGAT TLVLCDTNGG
TLPTELKAVV ARTVREFPGV EIGIHTHNDA GCGVANALAA VEAGATHVQG TINGVGERCG
NCDLVTTIAN LQLKMGLKVV EEEQLRRLTE VSNYVSEIMN ITPDAHRPYV GRSAFAHKGG
LHVDGISRDP RTYEHVAPEL VGNQRRTPVG ELSGKNSVRA KAAELGLEVE DVSTVLSAIK
RKEHEGYHYE AADASLALLI QRTTGEDEPL FELESLRVIS EKRAGGEATV EATIKLYIKG
QRVISTAEGN GPVNALDRAL RQAIEPHYPE LKEIHLSNYK VRILDEHRAT AATTRVLIDS
TDGKRVWGAV GVGENIIEAS WQALVDGLEY GINGAKKQKG
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