Gene Rxyl_3120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_3120 
Symbol 
ID4114919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp3130888 
End bp3131439 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content71% 
IMG OID638037887 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_645839 
Protein GI108805902 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGGTGC TGCGGACGGA GCTGCCCGGG GTGCTGGTCG TGGAGCCGCA GGTCTTCGGT 
GACGAGCGGG GCTTTTTCAT GGAGAGCTTC AACGGGCGCC GCTACCGGGA GGCGGGCCTC 
CCGGAGCGCT TTGTCCAGGA CAACCTCTCC CTCTCGCGGC GGGGGGTGCT GCGGGGGCTG 
CACTTCCAGC ACCCGCGGGG CCAGGGCAAG CTGGTCTCGG TGCTGCGGGG CGAGGTGTTC 
GACGTGGCGG TGGACGTGCG GCGGGGCTCG CCCACCTTCG GTCGGTGGGT CGGGCTCTCC 
CTCTCCGAGG AGAACCGGCG CCAGCTGTAC ATCCCCCCCG GCTTCGCCCA CGGCTTCGTG 
GTGCTGAGCG AGGCGGCGCT CTTCTTCTAC AAGTGCACCG AGTACTACGC CCCGGAGTGC 
GAGCGCACGG TGCTCTGGAG CGACCCGGAG ATCGGGATAG GCTGGCCCGT GGAGGAGCCC 
GTGCTCTCGG AGAAGGACCG AAAGGCCCCG GCGCTGCGGG AGATGCCGCC CGGGCACCTC 
CCCGCCTGCT AG
 
Protein sequence
MRVLRTELPG VLVVEPQVFG DERGFFMESF NGRRYREAGL PERFVQDNLS LSRRGVLRGL 
HFQHPRGQGK LVSVLRGEVF DVAVDVRRGS PTFGRWVGLS LSEENRRQLY IPPGFAHGFV 
VLSEAALFFY KCTEYYAPEC ERTVLWSDPE IGIGWPVEEP VLSEKDRKAP ALREMPPGHL 
PAC