Gene Rxyl_3107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_3107 
Symbol 
ID4114906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp3115869 
End bp3117227 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content71% 
IMG OID638037874 
Productglycosyl transferase, group 1 
Protein accessionYP_645826 
Protein GI108805889 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGTCC TGTTCGCCGC CCACCAGTTC TTCCCCGAGC ACTACGCGGG GGTCGAGGTC 
GTCACCCTGG GGCTTGCCAG GGAGCTGCGG GCGCGGGGGC ACGAGACCTT CGTGCTCGCC
GCCAAGAGGA GCATCCCCGG CAACGACATA GAGCCGGGCG AGACGGAGGA CTACGAGTTC
GAGGGCGTCC CCGTGCGCCG GGTGGGGCGC CCGAAGGAGG GGCCCAGCCG CCCGTACCGC
CTGGACTACG AGAACGAGGT CATGGCCGCC CGCGCGCGGG AGTACATGCG GGAGGTGCGC
CCGGACATCG TGCACGCCGA GCACTTCCAG GGGCTCTCCG CGGCGGTCAT CCCGGCCTTC
AAGGAGTTCG GCGTCCCGCT GGTGTACACG GCTACGGACT TCTGGGCCAT GTGCCCTGTT
GTGGACTTCC GCCGGCACGA CGGGGCGATG TGCCGGGGGC CGGAGCTCGC CCACTGCGTC
CGCTGCATAG CGAGCCGCCA CACGGGCACC CGCATGAAGG CCATCGCGGA CCGGACGCCC
GCCGCCGCCA TCAGGCTGGC CGGGGCGCTC TCCTCTACTC CTCTCGCGGC GCTCTCGCAC
CAGCTGCGCC AGATCGGGGC GCTCAGGGAG CGCCCCGACT ACATCAGGGA GCGGATGCGG
CTCGTGGACA GGATCATCGT GTACACCCGG CTAATGCGGG AGCTGTTGCT CGCCAACGGC
ATCGGCGAGG GGAAGATAGT TGTCTCGCCC TACGGGATAG ACACCTCGCG CATCGCGGGG
CTGCCGCCCG GCGACAGCGA GCCTCCGCCC TTGCGGGTCG GGTTCATAGG CACGCTGGCC
CCGCACAAAG GCTGCGACAT CCTCATCCGG GCCTTCAGGA TGCTCCCGCG GGAGATGCAG
GCCGAGCTGA AGATCTACGG CAACCTGGAG CGCTTCAAGC CCTTCGTGCG GCACCTGCGG
CGGCTCGCCG CAGGCGACCG CCGGATAAGC TTCCCCGGGC CCTTTCGCAG GGAGGAGGTC
GGGCGGGTGC TCTCCGGGCT CGACGTGCTG GTGGTGCCCT CCCGCTGGTA CGAGAACCAG
CCGGGCGTGA TCCTGGAGGC CTTCGCCGCC CGCATGCCGG TGGTCGCCAC GGACCTCGGC
GGCATGAGCG AGTTCGTGCG CCACGAGGAG AACGGGCTGC TCTTCGGGCT CGACGACCCG
GCGGACCTGG CCCGCCAGCT GCGCCGGCTC TACGAGGAGC CGGGCCTCCT GCGGCGCCTG
CGGGAGGGCA TAGGGCCGGT GAAGACGGTG GAGGAGGACG CCGCCGGGCT GGAGGCACTC
TACGAGTCCC TGCTCTCCGG CAGGGAGCGG GTGGTCTGA
 
Protein sequence
MRVLFAAHQF FPEHYAGVEV VTLGLARELR ARGHETFVLA AKRSIPGNDI EPGETEDYEF 
EGVPVRRVGR PKEGPSRPYR LDYENEVMAA RAREYMREVR PDIVHAEHFQ GLSAAVIPAF
KEFGVPLVYT ATDFWAMCPV VDFRRHDGAM CRGPELAHCV RCIASRHTGT RMKAIADRTP
AAAIRLAGAL SSTPLAALSH QLRQIGALRE RPDYIRERMR LVDRIIVYTR LMRELLLANG
IGEGKIVVSP YGIDTSRIAG LPPGDSEPPP LRVGFIGTLA PHKGCDILIR AFRMLPREMQ
AELKIYGNLE RFKPFVRHLR RLAAGDRRIS FPGPFRREEV GRVLSGLDVL VVPSRWYENQ
PGVILEAFAA RMPVVATDLG GMSEFVRHEE NGLLFGLDDP ADLARQLRRL YEEPGLLRRL
REGIGPVKTV EEDAAGLEAL YESLLSGRER VV