Gene Rxyl_3094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_3094 
Symbol 
ID4114893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp3104083 
End bp3104946 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content67% 
IMG OID638037861 
Producthypothetical protein 
Protein accessionYP_645813 
Protein GI108805876 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5039] Exopolysaccharide biosynthesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGATGT TCAGGACGCT CAAGATCCCG CCGCTGCGGA GGCCCGCGGC GGCAAAGCCC 
GGCGGCAGGC GGGAGGGAGA AGACCCGGCG GACAGCGGCC TTCTCCGGAC GCAGCGGGAG
ATAGAGCAGA GCCGAAGGAA GCTGCTCGGC TACATCGCGC AGGCAAAGGA CGTAACCTTC
ATCAGATCCC CGGGCAACAT CGGGGACCAC CTGATACACG CCGGCATCCG GCAGCTCCTC
TCGGGCACTT TCTACAGGGA GATCCCCTTC AAGAGGAGGC GCCTGCTGAG GAACTCCAGG
GGCCACACGG CCCTCGTCTC GGGAAGCGGG GGCTGGTGCG GCCCATACCA CAAGGTGATG
CCGCGGCTGC TGGAGATCGT GGAGGAGCGC TACGAGCGGG TCATAGTCCT CCCCTCGTCG
GTCGACGCCA CCGTTCCCGA GGTCCGCAGG GCCCTGCAGC GAACAGACGC CATCTTCTTT
GCCAGGGAGA TGGAGTCCTA CCGCCAGCTC GAGGAGCTCT GCCGCCACGC CGAGATAGCC
CACGACTGCG CCTTCTTCTT CGACTTCGCC CCCTACAGGA GGCCGGGCCG CGGCAGGCTG
CTGGCCTACC GGACCGACGA GGAGTCCGTC TCGGGCGAGG TGCCGCGGGG CAACCGGGAT
ATCTCGCGGT ACTGCGACTC TCTGGACGAG TGGCTGTGGA CGATCGCCGG GCACGAAGAG
GTGGAGACGG ACAGGGCGCA CGTCATGATC GCGGGGGCCA TGCTGGGCAA GCGGGTCAGG
TACAGGGCCG GCAGCTACCA CAAGGTTCCG GAGATAGCCC GCTTCGCGCT CAAGCACCTG
CGGGTAGAGC CGCTCGGGAC GTGA
 
Protein sequence
MRMFRTLKIP PLRRPAAAKP GGRREGEDPA DSGLLRTQRE IEQSRRKLLG YIAQAKDVTF 
IRSPGNIGDH LIHAGIRQLL SGTFYREIPF KRRRLLRNSR GHTALVSGSG GWCGPYHKVM
PRLLEIVEER YERVIVLPSS VDATVPEVRR ALQRTDAIFF AREMESYRQL EELCRHAEIA
HDCAFFFDFA PYRRPGRGRL LAYRTDEESV SGEVPRGNRD ISRYCDSLDE WLWTIAGHEE
VETDRAHVMI AGAMLGKRVR YRAGSYHKVP EIARFALKHL RVEPLGT