Gene Rxyl_3088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_3088 
Symbol 
ID4114887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp3097417 
End bp3098316 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content75% 
IMG OID638037855 
Productluciferase-like protein 
Protein accessionYP_645807 
Protein GI108805870 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID[TIGR03560] probable F420-dependent oxidoreductase, Rv1855c family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGACT ACGGCCACGA CCTGCTCTTC GGAGCCTTCA TAACCCCCAC CGCCCGGCCC 
CCCACGCACG CCGTCGAGCT GGCGGAGGCC GCCGAGCGGG CCGGGCTGGA CCTGGTGACC
TTCCAGGACC ACCCCTACCA GCCCGCCTTC CTCGACACCT GGACCCTGCT CTCCTACGTC
GCCGCGCGCA CCCGGAGGGT CCGCCTGAGC GGGAACGTCA TCAACCTGCC GCTCCGGCAC
CCGGCGGTGC TCGCCCGCAG CGCCGCCACC CTCGACCTGC TCTCCGGCGG GAGGTTCGAG
CTCGGCCTCG GGGCCGGGGG GTTCTGGGAC GCCATCGAGG CGATGGGCGG CCCCCGCCGG
TCGCCGGGGC AGGCCGTCGA GGCCCTCGAG GAGGCGATAG AGATCATCCG CGAGCTCTGG
GACACCGGCG AGCGCGGCGG GGTGCGCTTC GACGGCGAGC ACTACCGCCT CGAGGGCGCG
AAGCGCGGCC CCGCCCCCGC ACACGACATC GGGATATGGG TCGGGGCGTA CAAGCCGAGG
ATGCTGCGCC TCACGGGACG GGTGGCCGAC GGGTGGCTGC CCTCGCTCCC CTACCTCCCC
GGCGGCCCCG CGGACCTCGC GGAGATGAAC CGGCGCATCG ACGAGGGCGC GGCCTCCGCC
GGGCGCGACC CCTCCGCCGT GCGGCGCCTG CTGAACATCT CCGGGCGGTT CTCGCCCTCG
CGGGGCTCGC TGCTCTCCGG GCCGCCGCGG CAGTGGGCCG AGGAGCTCGC CGAGATCTCG
CTCCGCCACG GGGTGAGCGG CTTTATCCTC ATGGCGGACG ACGCGGCGGC GCTCGAGCTC
TTCGCCGCCG AGGTCGCCCC CGCCACGCGC GAGCTGGTCG CCGCCGGGCG CGCCGGCTAG
 
Protein sequence
MTDYGHDLLF GAFITPTARP PTHAVELAEA AERAGLDLVT FQDHPYQPAF LDTWTLLSYV 
AARTRRVRLS GNVINLPLRH PAVLARSAAT LDLLSGGRFE LGLGAGGFWD AIEAMGGPRR
SPGQAVEALE EAIEIIRELW DTGERGGVRF DGEHYRLEGA KRGPAPAHDI GIWVGAYKPR
MLRLTGRVAD GWLPSLPYLP GGPADLAEMN RRIDEGAASA GRDPSAVRRL LNISGRFSPS
RGSLLSGPPR QWAEELAEIS LRHGVSGFIL MADDAAALEL FAAEVAPATR ELVAAGRAG