Gene Rxyl_3085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_3085 
Symbol 
ID4114884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp3093295 
End bp3094206 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content73% 
IMG OID638037852 
Producthypothetical protein 
Protein accessionYP_645804 
Protein GI108805867 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGGCC TCGTGAGCAA GGTACTGCTG GCCACCGACG GTTCCAGAGA GGCCGCGCGC 
GCCGCCGGGA TGGCCCGGGA GCTCTCCGGG GCGCTCGGGG CCGAGCTGCA CGTTCTCTAC
GTGCAGCCCA TTCCGGAGGC GTACATCAAC CAGTGGGAGA TGGCCGGGCC GGAGTTTATC
GACGGGATCT TCAAGCGCGC CGAGGGCGAG GCGAGGAAGA AGGCGGAGGA GGAGGCGGCG
AAACTCGGGA AGGACGGGGT GGCGGGCGTC CACGCGGCGG TGGGCCGGAC CGACGCCGAG
ATCGTGCGCG TCGCCGAGGA GCTCGGCGCG GAGATCGTGG TGGTGGGCAG CCGGGGGCTT
GGCGCCCTGA GCCGCGCGCT GCTGGGCAGC GTCTCCACGA GCGTGGTGCG GCACGCCCAC
ACCTCCGTGC TGGTGGTCCG GGGGGAGGGG CGGGACAGGT ACCTCCCGGG CAGGATACTC
GCCGCCGTGG ACGGCTCCAG GGAGGCGGAG GCCGCGGCCC GCATGGCGGC CGAGATCTCG
GGCGCCACCG GCTCCGAGCT GCACCTGCTC TACGTGCTGG ACCTCACCCC CCGGCCTCCC
TACCCGCATC CTCTGGCCGG TGAGAGCTGG GACCGGCACC TGGAGGAGGC GAAGGAGAAG
GCCAGGGCGT TTGTCGAGGA GAGGGCAAAG CAGCTGCGGG AGGCGGGCGC GGAGGTCGCC
GTGGCCAAGG TGGCCTTCGG GGAGCCGGAC AAGAAGATAG TGGAGGAGGC CGAGGAGCTG
GGCGCGAGCC TCGTCGTCAC CGGGAGCCGG GGTCTGGGCA GCCTCCGGCG CTCGCTGATG
GGCAGCGTCT CGGACTCCGT GGTCCGGCAC GCCCACTGCC CGGTGCTCGT GGTGCGCCGG
CGCGCGGAGT AA
 
Protein sequence
MDGLVSKVLL ATDGSREAAR AAGMARELSG ALGAELHVLY VQPIPEAYIN QWEMAGPEFI 
DGIFKRAEGE ARKKAEEEAA KLGKDGVAGV HAAVGRTDAE IVRVAEELGA EIVVVGSRGL
GALSRALLGS VSTSVVRHAH TSVLVVRGEG RDRYLPGRIL AAVDGSREAE AAARMAAEIS
GATGSELHLL YVLDLTPRPP YPHPLAGESW DRHLEEAKEK ARAFVEERAK QLREAGAEVA
VAKVAFGEPD KKIVEEAEEL GASLVVTGSR GLGSLRRSLM GSVSDSVVRH AHCPVLVVRR
RAE