Gene Rxyl_3081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_3081 
Symbol 
ID4114880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp3090241 
End bp3090633 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content70% 
IMG OID638037848 
Producthypothetical protein 
Protein accessionYP_645800 
Protein GI108805863 
COG category[S] Function unknown 
COG ID[COG3462] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGGA ACGGCAAGGT ACTGGTCGGC GTCCTGGGCG TTCTCGCGCT GGCCGCGCTC 
GGCGCGCTCT TCTTCGCGCC CGCCATGGGA CACGGCGGCA TGATGGGGGG ATGGCAGGGG
CCGGGAGGCA TGATGGGGAG CGGCCCGGGC GCCTGGGCGT TCCTGTGGAT GCTGGTGCCC
GTCCTGTTCT GGACGGGGCT TCTCGTGCTG CTGGTGTGGG CCGTTCTGAG GCTCGTGCCG
CCGAGCGGCG GGAATGGCGG CCGGGAGGCT CCTGAAGAGA AGGCCGAGGA GATCCTCCGG
CGCCGTTTCG CCCGCGGAGA GATAGACGCC GAGGAGTACG AGGAGCGGAG GCGCCTGCTG
GAGGAACACC ACCAGAAGAG GCTCCCCAGA TGA
 
Protein sequence
MSRNGKVLVG VLGVLALAAL GALFFAPAMG HGGMMGGWQG PGGMMGSGPG AWAFLWMLVP 
VLFWTGLLVL LVWAVLRLVP PSGGNGGREA PEEKAEEILR RRFARGEIDA EEYEERRRLL
EEHHQKRLPR