Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_3077 |
Symbol | |
ID | 4114877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 3086237 |
End bp | 3088741 |
Gene Length | 2505 bp |
Protein Length | 834 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638037845 |
Product | ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter |
Protein accession | YP_645797 |
Protein GI | 108805860 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0474] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01517] plasma-membrane calcium-translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAGCAGA CGCGGGCGGA GAGGGCGGTG GCGGCCCTGC GGGCGATGTC CGCGGCCGAG GCGAGCGTGG TGCGCGACGG CGAGCGGAGG AGCGTCGGGG TCTCCGAGAT CGTGCCCGGC GACCTCATCC TCGTCGAGGA GGGCGACATG ATCCCGGCCG ATGCCCGCCT GATCGAGTGC ACGAGCCTGC AGGTCCAGGA GGCGTCGCTG ACGGGCGAGA GCCTGCCGGT GTCCAAGAGC TCTCGTGTCA TCGAGGGCGG GGCGGCTCTC GGGGACAGGA GCAACATGGT CTACTCCGGC ACGACGGTCG CCTACGGGCG CGGGAGGGCC GTGGTAACCG CCACGGGCAT GCGTACGGAG CTGGGCCGGA TCGCCCGCCT GATCGAACGA ACGGAGGAGG AGGCCACCCC GCTCCAGAGA GAGCTGGACC GCACCGGCAG GCTCCTCGGC CTCGCGGTGC TCGCCATAGC CGCGGTCGTC GTCGCCACGA TCCTGCTGGT CGAGGGGGTG CGCAGCCCCG GCGCTCTCCT CGAGGTCCTG ATCCTGGGTG TGGCCCTGGC CGTCGCGGCG GTGCCCGAGG GCCTGCCGGC CATCGTGACG GTGGTGCTCG CGATCGGCGT ACGCAGGATG GCCGCACGCA ACGCGATCGT GCGCAAGCTC CCCGCCGTCG AGACCCTCGG CTCGGCGACC GTGATCGCCT CCGACAAGAC CGGGACGCTC ACCAGAAACG AGATGACGGT GCGCGCCGTG GTCACCGCGG GCGGCCGCGC GAACCTGACC GGGACCGGTT ACGCCCCGGA GGGAGAGCTG CTGGGGAGAG ACATGTCGCC GCTCGCGGAC GCGACGGTGC GGCGGGAGGT CGAGCAGGCC CTCCTGGTGA CCGAAAGGGC GAACAACGCC GCCGTAAAGG AACGCGACGG GCGCTGGGTC GTGCGGGGCG ACTCCACGGA GGGGGCCCTG CTCGTGGCGG CGCGCAAGGC CGGGCTCTCC TCGGAAGCCC TCGACGAACG CTTCGAGCGC GTGGGCGAGG TGCCCTTCTC CTCCGAGCGC AAGATGATGA GCGTGGTTTA CAGGGACAGG AGGGAGGGGG GCCTGATCCT GTTCGCCAAG GGGGCGCCCG ACGTGTTGCT CGGGCGCTGC TCGCGGGAGC TGGTCGGCGG GGAGGCGCGG CCTTTGAGCG AGGAGCGCCG GAGGGAGATC TCCCTCCAGA ACGAGCTGCT CGCCGCGGAG GCGCTGCGCA CGCTGGGGGC CGCCTACCGT GCGGTGACGA ACGAGGAGCT GGAGCGGGGG CCGGACCATC GCATCGAGCA GAACCTGGTG TTCGTGGGGC TGGTGGGGAT GATGGACCCG CCCCGCGAGG AGGCGAGGCG CGCGGTCGCC GTCGCCAGGG ACGCCGGGGT TCGCACGATC ATGATCACCG GCGACCATCC CCGGACGGCG GCGGCCGTAG CCGGGCAACT GGGGATCTCC ACGGGAGAGC CGGCGCTCAC GGGTGCAGAG CTTGACGAAA TGACGGACGA GGCGCTACGC CGCGTGGTCC GGGAGTCTGC GGTGTACGCC CGGGTCAACC CCGAGCACAA GCTCCGCGTC GTCCGGGCGC TGCAGGAGAA CGGAGAGGTG GTGGCGATGA CCGGCGACGG CGTCAACGAC GCGCCCGCGC TCAAGACCGC GGACATCGGC GTCGCGATGG GCGTGACCGG CACCGATGTC TCCAGGGAGG CCGCCGACAT GGTCCTCACC GATGACAACT TCGCCTCCAT CGTGGCGGCC ATCGAAGAGG GGCGTTCCAT CTTCGCCAAC ATACAGAAGT TCCTGCGTTA TCTGCTCTCC TCCAACATCG GCGAGGTCCT GGTGATGTTC CTCGCCGTGC TCCTCGCGGG CGTGATCGGC CTGAGTGGAG AAGGCTTTCT GGCCCTGCCG CTCACGGCGA CGCAGATCCT GTGGATCAAC CTCCTCACCG ACGGTGCCCC GGCGCTCGCG CTCGGTCTGG AGCCCGCCGG GCCGGACGCG ATGCGCCGCC CTCCGCGCCC CAGGGGCTCC GGTGTGATCA CACGCCGCGC GTGGCTTGGC ATCGCCGTGA CCGGTCTCAT CATGGCGGCC GGGACGCTGT TCGTGCTCGA CTACGCCCTC CCCGGAGGGT ATATCTCGGG CTCAGGCGGC CTGCTCCGCG CCCAGACCAT GGCCTTCACC ACGCTGGTGC TGTTCCAGAT CTTCAACGTG TTCAACGCCC GCTCCTTCGG GCGCAGCGCG TTCGCCGGGC TCTTCCGCAA CCCGTGGTTG TGGGGGGCGC TCCTGCTGTC GCTGCTGCTG CAGGTTCTGG TGGTCTACGC GCCGTTCTTG CACCCCGCGT TCGGCACCGT CCCGCTATCC CTGCAGGAGT GGGGCCTCTG CGCCGCGGTC GCCAGCACGG TCCTGTGGCT GCGTGAGGCG GGCAGGCTCG CCTCGCGGGC GCAAGAGATC GTCCCCGGCA AGGAATGCCT CCGCCGGGGG AGGGCCGGAT CTTGA
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Protein sequence | MQQTRAERAV AALRAMSAAE ASVVRDGERR SVGVSEIVPG DLILVEEGDM IPADARLIEC TSLQVQEASL TGESLPVSKS SRVIEGGAAL GDRSNMVYSG TTVAYGRGRA VVTATGMRTE LGRIARLIER TEEEATPLQR ELDRTGRLLG LAVLAIAAVV VATILLVEGV RSPGALLEVL ILGVALAVAA VPEGLPAIVT VVLAIGVRRM AARNAIVRKL PAVETLGSAT VIASDKTGTL TRNEMTVRAV VTAGGRANLT GTGYAPEGEL LGRDMSPLAD ATVRREVEQA LLVTERANNA AVKERDGRWV VRGDSTEGAL LVAARKAGLS SEALDERFER VGEVPFSSER KMMSVVYRDR REGGLILFAK GAPDVLLGRC SRELVGGEAR PLSEERRREI SLQNELLAAE ALRTLGAAYR AVTNEELERG PDHRIEQNLV FVGLVGMMDP PREEARRAVA VARDAGVRTI MITGDHPRTA AAVAGQLGIS TGEPALTGAE LDEMTDEALR RVVRESAVYA RVNPEHKLRV VRALQENGEV VAMTGDGVND APALKTADIG VAMGVTGTDV SREAADMVLT DDNFASIVAA IEEGRSIFAN IQKFLRYLLS SNIGEVLVMF LAVLLAGVIG LSGEGFLALP LTATQILWIN LLTDGAPALA LGLEPAGPDA MRRPPRPRGS GVITRRAWLG IAVTGLIMAA GTLFVLDYAL PGGYISGSGG LLRAQTMAFT TLVLFQIFNV FNARSFGRSA FAGLFRNPWL WGALLLSLLL QVLVVYAPFL HPAFGTVPLS LQEWGLCAAV ASTVLWLREA GRLASRAQEI VPGKECLRRG RAGS
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