| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_3076 |
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| Symbol | |
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| ID | 4114876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 3083420 |
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| End bp | 3086173 |
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| Gene Length | 2754 bp |
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| Protein Length | 917 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638037844 |
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| Product | ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter |
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| Protein accession | YP_645796 |
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| Protein GI | 108805859 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01106] sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGGAGC CGGCGACCAG CCCGCAGGGG CTCCCGTTCG ACCCCGAGGA GCGGATAGAC
CTCCTGCTCG GCCACCTCGG GACCAGGCGC GAGGGGCTCG GCGAGCGGGA GGCGGCCCGG
AGGCTCGAGC AGTACGGCAG GAACGAGATC CGGCGCCGGG AGGGGCGCGG GTGGCTCCGG
GAGCTCGCCC GCCAGTTCAC CCACCCGCTG GCGCTGCTTC TGTGGGCGGC GGCCGCTCTG
GCCGCCGGCG GCGGCATGGG CGCTCTGGCC GTGGCGATAG TCGCGGTGAT CGTGCTGAAC
GCACTCTTCG CCTTCGCCCA GGAGCTCCAG GCCGAGCGAG CCACCGAGGC GCTCAGGGAG
TTCCTCCCGC CGCTCGCCCG GGTGCGCCGC GACGGTGAGG TCGCCGAGGT TCCGGCGAGC
TCGCTGGTGC CCGGCGACCT TCTCCTGCTC TCCGAGGGAG ACCGCATCTC CGCCGATGCG
CGCCTGATCT CGGGCTCCGT CGAGGTGGAC ATGTCCCCGC TGACGGGCGA GTCGCAGCCG
GTGGGGCGCA GCTCGGCGCG TGTGCGCCCG GCCTCCTCGC CGCTGGAGGC CGAGGATCTG
GTGTTCTCGG GGACGCTCGT CACCGCGGGC GAGGCGGAGG CGGTCGTCTA CGCGACCGGG
ATGAGCACCC AGCTGGGGCG GATCGCCGCG CTGACCCAGA GGGTGCGGGG GGAGGTCAGC
CCCCTGCAGG TACAGGTCAA CCGGGCCGCC AGGCTCATCG CCCTCGTCGC GGTGGTCGCC
GGCGTGGCCT TCCTCGCGTT CGGCACCCTG GTGGCCCGGC TGCCGCTCGC CGACGCGCTC
GTGTTCGCCA TCAGTCTGCT GGTGGCCAAC GTGCCCGAGG GGCTTCTGCC GACCATAACG
CTCGCGCTCG CGGTGGGGGT TCGGCGCATG GCCCGCCGCC GGGCGCTCCT GAAGCGCCTC
ACCGCCGTCG AGACCCTGGG CTCTACGGAT GTGATCTGCA CCGACAAGAC CGGCACCCTG
ACCGAGGGGC GGATGGTCGT CTCCCGCTTC TGGGCCGGCG GGGAGGAGCT GGTGCCCGAA
GACGGGCGTG AGAAGGAGGT GGGGGAGCCG TTCTCCGCGC TCCTGAGAAC GGCGGTTCGG
TGCTCGAACG CCCGGATAGA GCGCTCCGCG GAGGGCTGGG AGCGGAGGGG CGACCCCAGC
GAGAGCGCCC TGCTCGCGGC CGCCGCCGCT CTGGGCGAGG ACGTCGAGCG GGCCCAGGAG
GAGCGGTCGG AGCGCAGGCG CCGCCTCTAC CACTTCGACG CCCGGCTCAA GCGCATGACC
ACCGCCGACG AGGAGCCCGA TGGGGCCCTC TGGTACCACT CCAAGGGTGC GCCGCTGGAG
CTTTTGGGGC GCTGCGCCAG GGTGCGGACC CCCGAGGGCG AGAGGCCTCT CTCCGCCGCC
GACCGCGAAG CCGTGCGAGA GGCCTTCGAG CGCTACGCGG GCAGCGGCCT GCGGGTGCTC
GGCTTCGCCG AGAAGAGGGC GGGCGGGATG CAGCCGGAGG AGGAGCGGGA CCTCGCGGAG
GAGGGCCTCA CCTTCCTGGG GCTCGCGGCG CTCGAGGACC CGCCGCGCCC CGAGGTGGCA
GATGCGGTGG CGCGGTGCCA CCGGGCGGGC ATCCGGATCA TCGTGGTCAC CGGGGACCAC
GGCCTCACCG CCGGGGCGGT CGCGCGCCGG GTGGGGATCG TGCGCGGGGA GCCCAGGATC
GTCACCGGGG CGATGGTGGA CGGGATGAAG CAGGCCGAAC TCGACGCCCT CCTGCGCGAG
GAGAGGGAGC TGATCGTGGC CCGGTCCAAC CCCGAGACCA AGCTGCACAT AGTGGACGCC
CTGCGGGGAG AGGGGCACAC GGTCGCCATG ACCGGCGACG GCGTCAACGA CGCGCCCGCC
CTGCGCCGGG CCGACATCGG GGTGGCGATG GGCGGCTCGG GCACGGAGGT GGCGCGCGAG
GCGGCCACGA TGGTCCTCAC CGACGACTCT TTCTCCTCGA TCGTCGCCGC CGTGGAGGAG
GGACGCGTCG TCTACGACAA CATCCGCAAG TTCGTCACCT ACATCTTCGC CCACACCACC
CCGGAGGTGG TCCCGTTTCT GATCTACGCG CTCTCCGGAG GGGCCGTGCC GCTGCCCCTG
ACGGTGATGC AGATCCTGGC GATAGACCTG GGCACCGAGA CGCTGCCGGC CCTGGCCCTG
GGACGCGAGC CCGCGGAGCC CGGGATCATG GAGCGGCCGC CCCGCCCGCG CGGGCGCGGC
ATACTGGACC GGCCGATGCT GGTGCGGGCG TGGCTCTGGC TGGGCCTCGT CGAGGCCGCC
CTCGTCACCG GGGGTTTCTT CTACGTCCTC CTCTCCGCCG GCTGGTCTCC CGGAGAGGCC
GTCGGCCCCG GCAGCCCGCT TCACGCCTCC TACCTCGCCG CGACGACCAT GACGTTCGCG
GGCATCACCG CCTGCCAGAT CGGGACGGCG TTCGCCACCC GCACCTCCCG GGCCTCGCTG
CGCCAGATCG GGGTGTTCTC CAACCGGCTG CTTCTGTGGG GCATCCTCTT CGAGGTCCTC
TTCGCGGCCG CTGTGATCTA CCTGCCGCCC CTGCAGCGGA TCTTCGGTAC CGGTGCCCTC
GGGGTGCGCG AGCTGCTGGT GCTCGCCGCC TTCCCGCTGG TCGTATGGGC GACCGACGAG
CTGCGGCGCG CCTTCGTTCG CCGGCGCGCC GGTTGGCCCG AAGGGCCGGC ATAG
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| Protein sequence | MTEPATSPQG LPFDPEERID LLLGHLGTRR EGLGEREAAR RLEQYGRNEI RRREGRGWLR
ELARQFTHPL ALLLWAAAAL AAGGGMGALA VAIVAVIVLN ALFAFAQELQ AERATEALRE
FLPPLARVRR DGEVAEVPAS SLVPGDLLLL SEGDRISADA RLISGSVEVD MSPLTGESQP
VGRSSARVRP ASSPLEAEDL VFSGTLVTAG EAEAVVYATG MSTQLGRIAA LTQRVRGEVS
PLQVQVNRAA RLIALVAVVA GVAFLAFGTL VARLPLADAL VFAISLLVAN VPEGLLPTIT
LALAVGVRRM ARRRALLKRL TAVETLGSTD VICTDKTGTL TEGRMVVSRF WAGGEELVPE
DGREKEVGEP FSALLRTAVR CSNARIERSA EGWERRGDPS ESALLAAAAA LGEDVERAQE
ERSERRRRLY HFDARLKRMT TADEEPDGAL WYHSKGAPLE LLGRCARVRT PEGERPLSAA
DREAVREAFE RYAGSGLRVL GFAEKRAGGM QPEEERDLAE EGLTFLGLAA LEDPPRPEVA
DAVARCHRAG IRIIVVTGDH GLTAGAVARR VGIVRGEPRI VTGAMVDGMK QAELDALLRE
ERELIVARSN PETKLHIVDA LRGEGHTVAM TGDGVNDAPA LRRADIGVAM GGSGTEVARE
AATMVLTDDS FSSIVAAVEE GRVVYDNIRK FVTYIFAHTT PEVVPFLIYA LSGGAVPLPL
TVMQILAIDL GTETLPALAL GREPAEPGIM ERPPRPRGRG ILDRPMLVRA WLWLGLVEAA
LVTGGFFYVL LSAGWSPGEA VGPGSPLHAS YLAATTMTFA GITACQIGTA FATRTSRASL
RQIGVFSNRL LLWGILFEVL FAAAVIYLPP LQRIFGTGAL GVRELLVLAA FPLVVWATDE
LRRAFVRRRA GWPEGPA
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