| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_3073 |
|---|
| Symbol | |
|---|
| ID | 4114873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 3079199 |
|---|
| End bp | 3081619 |
|---|
| Gene Length | 2421 bp |
|---|
| Protein Length | 806 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638037841 |
|---|
| Product | phosphoenolpyruvate synthase |
|---|
| Protein accession | YP_645793 |
|---|
| Protein GI | 108805856 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
|---|
| TIGRFAM ID | [TIGR01418] phosphoenolpyruvate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGACGA AGCTGCGCTG GGTGCGCCGG TTCTCGGAGA TCGGCCTGGA GGACGTCCCG
CTGGTCGGGG GGAAGAACGC CTCTTTGGGG GAGATGACGC GGGAGCTGGG GAGCCTGGGC
ATCCGGGTGC CCGAGGGGTT CGCGATCACC GCCGAAGCCT ACCGGTACTT CCTGGGGGAG
AACGAGCTGG AGGAGCCGAT ACGCGAGGTG ATCTCCGGCA TGGACCGCGA GGACCTGGAG
GACCTCGCCC GCCGCAGCCG GAAGGTGCAG GATGCGATCC TGGCCGGGAT CTTCCCGGAT
GACCTGGAGG TGGAGATCCT GCGCTCCTAC CGCGAGCTCT CCGCCGCCTG CGGCGAGGAG
CACGCCGACG TCGCGGTGCG CTCCTCGGCC ACCGCCGAGG ACCTGCCCAC CGCCAGCTTC
GCCGGCCAGC AGGAGAGCTT CCTCAACGTG CGCGGCGAGG TGCAGCTTCT CGACGCCGTC
AGGCGGTGCT TCGCCAGCCT GTTCACCCCC CGGGCCATCG GCTACCGGGA GGACATGGGC
TTCGACCACT TCGACGTGGG CCTCTCGGTC GGCGTGCAGA AGATGGTCCG CGCCGACCTG
GCCTCCTCCG GCGTGATCTT CACCCTCGAC CCCGAGTCCG GCTTCCCCGA CGTGGTCTAC
GTCACCTCGA CCTGGGGCCT CGGCGAGAAC GTGGTGCAGG GCCGGGTGGT CCCGGACGGG
TTCTACGTGC ACAAGCCGAC CCTTAGGGAG GGCTACGCGC CGCTGGTGCG CCGGCGCCTG
GGGAGCAAGG AGTTCCGCCT GGTCTACGAC GAGTCCGGCC ACCGCGCGGT GAAGAACGTG
CCCACCCCCC CGGAGGAGCG CGAGGCGTTC TCCCTCCCCG ATGCGGAGGT GCTGCGGCTC
GCCCGCTGGG CCGTCCTCAT CGAGGACCAC TACAGCGGGA AGCACGGCCG CCGCACCTTC
ATGGACATCG AGTGGGCCAG GGACGGGCTC ACCGGGGACC TCTTCATAAT CCAGGCGCGC
CCCGAGACGG TGCACGGCGC CCGCAGGTCC CCGGCGGTAA AGCTCTACGC CCTCAAGGAG
GAGGGAGAGG TGCTCGCCGA GGGGCTGGCG GTGGGGAGCG CCGTGGCCTC CGGCGAGGCG
CGGGTGCTGC GGGACCCGAG CGGGATCTCG AGCTTCCGCC CCGGCGAGGT GCTCGTCACC
GAGATGACCG ACCCCGACTG GGAGCCGATC ATGAAGGCGG CGTCGGCCAT AGTCACCGAC
CGGGGCGGAC GCACCTCGCA CGCGGCGATC GTCGCCCGCG AGCTCGGCAT CCCCGCCGTG
GTCGGCACGC GGAACGCCAC GCGGAGGGTG AGGGGCGGCG AGCCCGTCAC CGTCTCCTGC
GCCGGGGGCG AGACCGGGCG CGTCTACCGG GGGGCCCTGC GCTACGAGGA GACGGAGGTG
GACCCGGCCT CCTTCGGTCG GCCGAAGACC TCGGTCATGA TGAACGTCGG CGACCCCGAG
AAGGCCTTCG GGCTCGCGAT GCTCCCCAAC GACGGCGTGG GGCTGGCGCG GATGGAGTTC
GTGTTCGCCT CCTGGGTCGG CATACACCCC CTCGCCCTGA CCCGCTTCGA GTCGCTGCCG
CCGAAGACGA AGCTGGAGGT CTCCCGCCGC ACCGGGGGCT ACGCAGACAA GCGGGAGTTC
TTCGTGGACC GGCTCTCGCA GGGCATAGGG ACGCTCGCCG CGGCGTTCTG GCCGAAGCCC
GTGATCCTGC GCCTCTCGGA CTTCAAGACC AACGAGTACG CCCACCTCCT CGGCGGCGAG
CTCTTCGAGC CCCGCGAGGA GAACCCCATG CTCGGCTGGC GCGGGGCGAG CCGCTACCAC
CACCCGGACT ACCGGGAGGG CTTCATGCTG GAGGTCGCGG CCATCCGGCG GGTGAGGGAG
ATCTTCGGCC TCAAGAACCT CAAGGTGATG GTCCCCTTCT GCCGCACCCC CGAGGAGGGA
GAGCGGGTCT TAGAGGTGAT GGAGGAGGGC GGCCTCGAGC GCGGGGCCGA CGGCCTCGAG
GTCTACGTCA TGGCCGAGAT CCCCTCCAAC GTCGTCCTGG CGCGGGAGTT CGCCCGCATC
TTCGACGGCT TCTCCATCGG CTCCAACGAC CTCACCCAGC TCGTGCTGGG CGTGGACAGG
GACTCCGAGC GGGTCTCCTC CCTCTTCGAC GAGCGCGACG AGGCGGTCAA GAGGATGTGC
GCCGAGCTGA TAGAGGAGGC GCACCGGGCG GGCCGGAAGG TCGGCATCTG CGGCCAGGCC
CCCTCGGACT ACCCGGAGTT CGCGGCGTTC CTGGTCGAGA GGGGGATCGA CTCCATCAGC
CTGAGCCCCG ACGCCGTGGT GCCGACCACG CTCGAGATCC TCAGGATGGA GCGGGCCGCG
GCCGGCGAGG GGAGCTCTTA G
|
|---|
| Protein sequence | METKLRWVRR FSEIGLEDVP LVGGKNASLG EMTRELGSLG IRVPEGFAIT AEAYRYFLGE
NELEEPIREV ISGMDREDLE DLARRSRKVQ DAILAGIFPD DLEVEILRSY RELSAACGEE
HADVAVRSSA TAEDLPTASF AGQQESFLNV RGEVQLLDAV RRCFASLFTP RAIGYREDMG
FDHFDVGLSV GVQKMVRADL ASSGVIFTLD PESGFPDVVY VTSTWGLGEN VVQGRVVPDG
FYVHKPTLRE GYAPLVRRRL GSKEFRLVYD ESGHRAVKNV PTPPEEREAF SLPDAEVLRL
ARWAVLIEDH YSGKHGRRTF MDIEWARDGL TGDLFIIQAR PETVHGARRS PAVKLYALKE
EGEVLAEGLA VGSAVASGEA RVLRDPSGIS SFRPGEVLVT EMTDPDWEPI MKAASAIVTD
RGGRTSHAAI VARELGIPAV VGTRNATRRV RGGEPVTVSC AGGETGRVYR GALRYEETEV
DPASFGRPKT SVMMNVGDPE KAFGLAMLPN DGVGLARMEF VFASWVGIHP LALTRFESLP
PKTKLEVSRR TGGYADKREF FVDRLSQGIG TLAAAFWPKP VILRLSDFKT NEYAHLLGGE
LFEPREENPM LGWRGASRYH HPDYREGFML EVAAIRRVRE IFGLKNLKVM VPFCRTPEEG
ERVLEVMEEG GLERGADGLE VYVMAEIPSN VVLAREFARI FDGFSIGSND LTQLVLGVDR
DSERVSSLFD ERDEAVKRMC AELIEEAHRA GRKVGICGQA PSDYPEFAAF LVERGIDSIS
LSPDAVVPTT LEILRMERAA AGEGSS
|
|---|
| |