Gene Rxyl_3057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_3057 
Symbol 
ID4114857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp3064524 
End bp3065390 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content75% 
IMG OID638037825 
Producthypothetical protein 
Protein accessionYP_645777 
Protein GI108805840 
COG category[I] Lipid transport and metabolism
[R] General function prediction only 
COG ID[COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase 
TIGRFAM ID[TIGR00147] lipid kinase, YegS/Rv2252/BmrU family 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATCCTGA ACCCCACGGC GGGGCGCGGC CGGGCGGCGG CGCTCAGGCC GAGGATCTCG 
CGGTTCTTCG AGGAGCGGGG GGCGCGCGCC GTCTGGCACG TCACCCGCCG GCCGGGGCAC
GCTAGCCAGA TCGTGGGGGA GCTGCCGCCG GGGCTCCCGG CGGTGGCCGT CGGGGGGGAC
GGGACGGTGC ACGAGGTGGC GCGGGCCTGC GCCGGCACCG GACGCCCGAT GGGCGTGCTC
CCCGCGGGCA GCGGCAACGA CTACGTAAAG GCCCTCGGCG TCGGGGGGGA CCTGCGGCGG
GCGATGGAGG TGGTCCTCGC GGGCGAGGCG CGCGCGGTGG ACGCCGGGGA GGTGAACGGC
GAGTTCTTCG ACAACGGGCT CGGCATAGGC TTCGACGCCG AGGTCGCCGC CGGCGTGGTC
AAGGCCCCGG CCTACCTGGG CGGCGCCGGG CGGTACATGT GGTCCGTGGC CAGGCTGCTG
TGGGGCTTCA CCTGCCATCC CGCGCGGCTC TCCTTCGACG ACGGGACGGC GGTGGAATCG
GAGACCATCC TGGTGGCGGT CGCGCTCGGC ACCACCTACG GGGCCAGGTT CCGCCTCGCG
CCGGAGGCCC GCCTGGACGA CGGGGCGTTC GACGTGGTGT GGTCAGACAG GGTGAGCCGC
GCCGAGGTCA TAAGGCTCAT CCCCTCTGCG CTGCGGGGCA CCCTCCTGCG GCACCCCAAG
GTTCACATGC ACCGCGCCCG GGAGGTGGAG GTGGAGCTCG GCCGCGTCGT ACCGGCCCAC
GTGGACGGCG AGATCCTGCC CCCCACCCGG CTCTTCAGGG CGCGGGTGCT GCCCGGCGCG
CTGCGGGTGC TGGCCCCCCG CGGGTAG
 
Protein sequence
MILNPTAGRG RAAALRPRIS RFFEERGARA VWHVTRRPGH ASQIVGELPP GLPAVAVGGD 
GTVHEVARAC AGTGRPMGVL PAGSGNDYVK ALGVGGDLRR AMEVVLAGEA RAVDAGEVNG
EFFDNGLGIG FDAEVAAGVV KAPAYLGGAG RYMWSVARLL WGFTCHPARL SFDDGTAVES
ETILVAVALG TTYGARFRLA PEARLDDGAF DVVWSDRVSR AEVIRLIPSA LRGTLLRHPK
VHMHRAREVE VELGRVVPAH VDGEILPPTR LFRARVLPGA LRVLAPRG