Gene Rxyl_3042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_3042 
Symbol 
ID4114842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp3050649 
End bp3051329 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content61% 
IMG OID638037810 
ProductGntR family transcriptional regulator 
Protein accessionYP_645762 
Protein GI108805825 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGTAC CCGAGCCGAC AAAGAAGCTG AACAAAACCC TTATGCGGGA GGAGGTGTAC 
TCGACACTCA AAGAATGGAT ATTGGATGGC ACCCTTAAGC CAAAAGAGAA GTTGAGAGAT 
ACAGAATTAG CGAGGGCTCT GGGGGTCAGC CGCATGCCCG TCCGAGAGGC CTTGCGCCGG 
CTAGAGGACG AGGGTCTGGT CGAGACGGCC ACCAACCGCT GGACCCGAGT TGCCACGGTA 
GACGTGAGCC AGGCCAAGAG GATATACCCG ATCCTGATAG CTCTGGAATC TCTGGCGGTT 
TCCCTGGCTG CGCACCGGCT TGAAGAGCGA GATCTACGCC TTATGGAGGA AGCCAACGAG 
CGCCTGCGCA GGATGCTGCG TGCTGGGAAG GCCGTGGAAG CCTCGGAGGC CGACCGGGAC 
TTCCACGAGG TTCTGATGAG TAGAACGGAC AACCCCGACC TCATTAGGAT CGTGGACGAT 
CTCAAAGCCA AGCTGCGTCT TCTGGAGGTG GTCTACTTCG GTGGGAGCAT AGTTGCCGAG 
CGCTCCGCCG AGGAGCACAA AGAGATACTG GCCGCCCTGC GAGAGGGCGA CACCGGGCGC 
GCCAGCAGGG CCGTCGAAGA CAACTGGCGC AACAGCCTGC AGAGGGTTCT CGAGCAGCTC 
GGCGGAGAGA CGGGCCGGTA G
 
Protein sequence
MPVPEPTKKL NKTLMREEVY STLKEWILDG TLKPKEKLRD TELARALGVS RMPVREALRR 
LEDEGLVETA TNRWTRVATV DVSQAKRIYP ILIALESLAV SLAAHRLEER DLRLMEEANE 
RLRRMLRAGK AVEASEADRD FHEVLMSRTD NPDLIRIVDD LKAKLRLLEV VYFGGSIVAE 
RSAEEHKEIL AALREGDTGR ASRAVEDNWR NSLQRVLEQL GGETGR