| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_3034 |
|---|
| Symbol | |
|---|
| ID | 4115969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 3042047 |
|---|
| End bp | 3042844 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638037803 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_645755 |
|---|
| Protein GI | 108805818 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.971108 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCCAAAA GACAACACCA ACTAGCCATC TCTGTGAAAG ATGTCTCGAA AGTATTTGAG
CTAGAAGGTC GGGAGCTGCT GGTCCTGAGC AGCATCTCCT TCAAAGTAAA AGATGGGGAA
TTTGTCTCAA TAATCGGCCC CTCTGGGTGC GGCAAGTCCA CCTTGCTGCG AATCATCGCT
GATATCGTCA ATCCTAGCTC GGGCACCGTC ATGGTCCATG GCGGCTCGGC TGCCGAGGCG
CGCAAAGCTC GAAAGTTCGG TTTTGTCTTC CAGGACCCTG TGCTTCTGCC CTGGCGAACA
GCGCTTGAGA ACGTAGAGCT TCCTCTCATC ATCGCAAAAC GAAATACAAA AGAGGAAAGA
CGCCGCGCAG CGGAACTTTT TGAGCTCGTG GGCCTTTCTG GATTCGAGTC CGCCCAACCT
TCAGAGCTTT CTGGCGGCAT GAGCCGTCGT GTAGCTATTG CCCGTGCTCT TGTGCTCCAG
CCGGAGATAT TGTTGCTTGA TGAACCCTTT GGAGCTCTGG ACGAGATTAC CCGCCAGAAG
ATGAACCTCG AGCTGCAAAG AATATGGGCG GAATCCAGAA CAACGGCACT ACTTGTCACT
CACAACGTAG GCGAGGCCGT CTTCCTTTCA GATAGAGTGT TCGTCATGGG AACAAAGCCA
GGACGATTAA TATCAGATGT AGCCATAAAC CTACCACGGC CGCGGAATGC AGAGTTGCTT
GAGAAACCCG AGTTCTTCCA ATATTCTGCG CATCTGACGC GTCTTCTCAT GTCCACAATT
GGAGAATCGA AACAATGA
|
|---|
| Protein sequence | MPKRQHQLAI SVKDVSKVFE LEGRELLVLS SISFKVKDGE FVSIIGPSGC GKSTLLRIIA
DIVNPSSGTV MVHGGSAAEA RKARKFGFVF QDPVLLPWRT ALENVELPLI IAKRNTKEER
RRAAELFELV GLSGFESAQP SELSGGMSRR VAIARALVLQ PEILLLDEPF GALDEITRQK
MNLELQRIWA ESRTTALLVT HNVGEAVFLS DRVFVMGTKP GRLISDVAIN LPRPRNAELL
EKPEFFQYSA HLTRLLMSTI GESKQ
|
|---|
| |