Gene Rxyl_3033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_3033 
Symbol 
ID4115968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp3041275 
End bp3042015 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content51% 
IMG OID638037802 
Productamidohydrolase 2 
Protein accessionYP_645754 
Protein GI108805817 
COG category[R] General function prediction only 
COG ID[COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.277355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTGTAG ACGCTTACAA CAACGTCTGG GAAGCCGGGG GCACCTCTGA CTATCTTACA 
GGCGAAAATT ACACGGTCGA GATGATGCTC AAGTCCATGG ACGCTGCAGG AATAGACATG
GCCGTTGGGT GTTCTCTGGG ACAGCTGGTC GAGAACTCCT ATATAGCGTC TATATCACGC
AGGTATAACA GTCGGATCAT CGGCTTCGGC CAAGTCAACC CTCGCCTCTC TAACGCGGTA
GAAGAAATCA GGGTCTGCGC CGAGGAATAC GGATTGCGAG GGCTCAAACT ACATCCGACT
ATGCACGGCT ACCATTTTGC GGATCACGGT TTGCTAGACC CTATTTTCGC TGCCTGCCGT
GATCATGGAC TCGTTGTTCT TGTCAACGCT CTCGACGACC CTTTTTGTGC ACCTTTTTCT
ATCGAAGAGA TAGCTCGTGG TTTTCCAGAT GTGCCAGTAC TCATCGCACA TATGGGCACA
GTGTGGAATG TTATGGAGGC GCTTCTCGTA GCCGAGCGGA ACGGAAATAT TTATCTGGAA
ACCTCTTCGA CTCAACTGAT CGATGTCAAG ATGGCCTATG ATCGGCTTGG ACCAAAGAAG
CTGATTATGG GCACCGACTG GCCCGGTAGC GACTTCGACC TTGAACGAAG AAAAATCGCC
AAAGCCATAC CGGACAAAGA AGATCGCAGC CTTGTCGAAG GCAGAAACCT GTGCGACCTA
CTAAAGCTGG ACAATCCATG A
 
Protein sequence
MIVDAYNNVW EAGGTSDYLT GENYTVEMML KSMDAAGIDM AVGCSLGQLV ENSYIASISR 
RYNSRIIGFG QVNPRLSNAV EEIRVCAEEY GLRGLKLHPT MHGYHFADHG LLDPIFAACR
DHGLVVLVNA LDDPFCAPFS IEEIARGFPD VPVLIAHMGT VWNVMEALLV AERNGNIYLE
TSSTQLIDVK MAYDRLGPKK LIMGTDWPGS DFDLERRKIA KAIPDKEDRS LVEGRNLCDL
LKLDNP