Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_3033 |
Symbol | |
ID | 4115968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 3041275 |
End bp | 3042015 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638037802 |
Product | amidohydrolase 2 |
Protein accession | YP_645754 |
Protein GI | 108805817 |
COG category | [R] General function prediction only |
COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.277355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTGTAG ACGCTTACAA CAACGTCTGG GAAGCCGGGG GCACCTCTGA CTATCTTACA GGCGAAAATT ACACGGTCGA GATGATGCTC AAGTCCATGG ACGCTGCAGG AATAGACATG GCCGTTGGGT GTTCTCTGGG ACAGCTGGTC GAGAACTCCT ATATAGCGTC TATATCACGC AGGTATAACA GTCGGATCAT CGGCTTCGGC CAAGTCAACC CTCGCCTCTC TAACGCGGTA GAAGAAATCA GGGTCTGCGC CGAGGAATAC GGATTGCGAG GGCTCAAACT ACATCCGACT ATGCACGGCT ACCATTTTGC GGATCACGGT TTGCTAGACC CTATTTTCGC TGCCTGCCGT GATCATGGAC TCGTTGTTCT TGTCAACGCT CTCGACGACC CTTTTTGTGC ACCTTTTTCT ATCGAAGAGA TAGCTCGTGG TTTTCCAGAT GTGCCAGTAC TCATCGCACA TATGGGCACA GTGTGGAATG TTATGGAGGC GCTTCTCGTA GCCGAGCGGA ACGGAAATAT TTATCTGGAA ACCTCTTCGA CTCAACTGAT CGATGTCAAG ATGGCCTATG ATCGGCTTGG ACCAAAGAAG CTGATTATGG GCACCGACTG GCCCGGTAGC GACTTCGACC TTGAACGAAG AAAAATCGCC AAAGCCATAC CGGACAAAGA AGATCGCAGC CTTGTCGAAG GCAGAAACCT GTGCGACCTA CTAAAGCTGG ACAATCCATG A
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Protein sequence | MIVDAYNNVW EAGGTSDYLT GENYTVEMML KSMDAAGIDM AVGCSLGQLV ENSYIASISR RYNSRIIGFG QVNPRLSNAV EEIRVCAEEY GLRGLKLHPT MHGYHFADHG LLDPIFAACR DHGLVVLVNA LDDPFCAPFS IEEIARGFPD VPVLIAHMGT VWNVMEALLV AERNGNIYLE TSSTQLIDVK MAYDRLGPKK LIMGTDWPGS DFDLERRKIA KAIPDKEDRS LVEGRNLCDL LKLDNP
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