| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_3028 |
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| Symbol | |
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| ID | 4115964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 3035094 |
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| End bp | 3036782 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638037798 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_645750 |
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| Protein GI | 108805813 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000374916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCTGGCA AAGGAGAGTC TGTGGACGGC TATACCTGCG ATGAGTTGTG TAAGCGGCAA
AGTGGTTTGC TGACCCGCCG GAACTTTCTC AGGCTCAGCG GGTTTGGCTT AGCAGGCGCC
GCGCTGCTTG GCGCAACCGG TTGTGGCGGC GAGAGGCGGG GGGTAGGAGA CAGAGGAGAG
GGAGGTGGGT CCGCCCAGAG AGGCGGTACG TTAGTCTTTG GTGTGGATGC GATTCAGGGT
AACTTCGACC CTGGCATCTT CGCCACCTTC GGAGACTGGA TGGCCATAGA CTGCATAGCC
CGCGGGCTGA CGCACATAGA CTACAGGAGC ACTGAGCCCC AGCCTGCACT CGCCGAGAGC
TGGAAGATCT CTGACGATGG TAGGGTCTAC ACTTTCAGGC TGCGCGACGG TGTAACCTTC
CACGACGGCA ACCCTCTCAC TGCCGAGGAC TGTCGGCGCT CTTTTTTAAG GCTCATGGAT
GAGAACGACC CGAGCCGTCC TGAGGGCACC TATGCCATCG CCGAGCTTGG CGGGGAGAAT
GTCAAGGAAG TCCGGGCTGT AGACGAGAGA ACCTTTGAGA TCACGCTGGG CGAGCCGGAC
GTCGCCTTTC TTGCCAGGCT CTCCAACCCG AACGGTGTGA TCCTCTCCGC TGCAGCCATA
GACAAGTACG GAGACAGGAT CGGCAATAAC CTGGTGGGTG CGGGTCCCTT CAAGCTCGTG
GACGCTCAGG CCGGGCAGAA GGTAACGCTC GAGGCCTTTG AGGACTACTG GGAGGGCAGG
CCTCCGCTCG ACCGGGTTGT GCTCCAGGTT CTGCCGGACC CGCAGGCGCT CACCAGCGCT
CTGCAGAGTG GTCAGGTACA GGCATCGAAC TTCCTGCCGT ACTCAAGCGT CGACAGGCTT
AAGAACAGCG GTAACCTAAG GCTGTATGAG CCCAAGCCCT ACATAGACAT CTTTATCGAG
ATGAACGTGA GCGTGCCGCT GCTCTCCGAC CTACGGGTAC GGCAGGCGAT CAACTACGCC
ATAGACCGAA AGTCCATAAT CGACGAGGCG TTCGCAGGGC TTGCGAAAGA ACCAGCCTAC
ATGGTTTCTC CGCCCGAACT GGGTTATGAC GAGAGTCTCG AGAAGTACTC GACCCAGGAC
ATGGATCGTG CGAGGAAGCT CCTGAAAGAG GCAAGGGCTG AAGGGGAGCG GGTAAGCCTG
CTCAGCCAGA ATATTCTCTT TTGGCCCAAG GTGGGTCAGA TCGTCACCTC CAACCTGGAG
GAGCTAGGCT TGAAGGTTGA GGCTCAGTAC CTGGACTCCG GAACCCTAGC TAGCAGAAAG
GCCGACCCCA AGGCTCACGA GCTCTTCACC GAGCAGCGTT CGGCATTTGT CCCCGACCCT
GACAACAAGC TTTCCCCGCT CCTCGCTAGC GACTCTTTCG TCGCACAGAA CTTCACGGTA
AGTCACAAGC TGCCTATACA GAAGGAGATA GACCGACGTT TGGTGGAAGC ACGCCAAGAG
ACGGACCCGC AAAAGAGGGC CCAGATGTAC GTTAGCCTCC AGCGGCTGCT CGCCGAGAAG
CAGATGGTGC GGGCGATGGT CGCCTACATC TTCACGCCAA CGGCCACTAC TTTGGACGTT
ACGGGTTTTA ACGCCGACGC TTTGGGTACC TACCGGCTCT TTTTAGAGAA GACGGGATTT
TCGGGGTAG
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| Protein sequence | MPGKGESVDG YTCDELCKRQ SGLLTRRNFL RLSGFGLAGA ALLGATGCGG ERRGVGDRGE
GGGSAQRGGT LVFGVDAIQG NFDPGIFATF GDWMAIDCIA RGLTHIDYRS TEPQPALAES
WKISDDGRVY TFRLRDGVTF HDGNPLTAED CRRSFLRLMD ENDPSRPEGT YAIAELGGEN
VKEVRAVDER TFEITLGEPD VAFLARLSNP NGVILSAAAI DKYGDRIGNN LVGAGPFKLV
DAQAGQKVTL EAFEDYWEGR PPLDRVVLQV LPDPQALTSA LQSGQVQASN FLPYSSVDRL
KNSGNLRLYE PKPYIDIFIE MNVSVPLLSD LRVRQAINYA IDRKSIIDEA FAGLAKEPAY
MVSPPELGYD ESLEKYSTQD MDRARKLLKE ARAEGERVSL LSQNILFWPK VGQIVTSNLE
ELGLKVEAQY LDSGTLASRK ADPKAHELFT EQRSAFVPDP DNKLSPLLAS DSFVAQNFTV
SHKLPIQKEI DRRLVEARQE TDPQKRAQMY VSLQRLLAEK QMVRAMVAYI FTPTATTLDV
TGFNADALGT YRLFLEKTGF SG
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