| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_3008 |
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| Symbol | |
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| ID | 4115807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 3016090 |
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| End bp | 3017343 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638037778 |
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| Product | mandelate racemase/muconate lactonizing-like protein |
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| Protein accession | YP_645730 |
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| Protein GI | 108805793 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.334254 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGGATAA CCGACGTTCG CACCGCGGTC GTCGAGGCCA ACTACGACTG GACCTTCGTC
CGGATCTACA CCGACGAGGG GCTGACCGGG CTGGGGGAGA GCTTTCTGGC CCCGGGGCTC
ACCGGCATCA TCCGGGACCT GAAGCCCCTG CTGGTCGGCC AGGACCCGCT GGACGTGGAC
CGGCTGTTCT CCAGGATGCG CTGGGCCGCC TCCGGGGCGG GCTCCGTGGC CGGCCTGGTC
TACAACGCCA TCTCGGGCAT AGAGGCGGCG CTCTGGGACC TCGCCGGCAA GCACTACGGC
GTGCCCGTCT TTCGGCTGCT GGGGGGAAGG CACCGCGACC GGGTGCGCGT CTACGCCGAC
TGCCACGCCG GCGAGGCGCT GGAGGCCTTA AGCTCCGTCA TGATCCCGCG CCGCCCCCGG
TGGCTCTCGC CGGCGGGGGC GCCTCCCCCG GCGGGCGACC CGGTGCACGG GCGGGCCTTC
GGGCTCGAGG AGCCGGGGGA GGCCTTCACC CCCGAGATGT ACGCCGCCCG GGCCCGGGAG
GTGGCCGCGA TGGGCTTCAC CGCGCTCAAG TTCGACCTCG ACGTGCCCAA CCCCCACACC
CTGGACCCCC ACTCCGGGAC CCTCACCCAC GCCGAGATAC GGCACATGGT CTCGCTGGTG
GAGGCGGTCC GGGAGGCGGT CGGCGACGGG GTGGACATCG CCTTCGACCT GCACTGGCGC
TACAACGTCT CCGACGCGGT GCGGCTGGCC TGCGAGCTCG AGCCCTACGG GCTCATGTGG
CTGGAGGACC CGGTGCCGCC GGAGAACGTG GAGGCGCTGC GGCGGGTGAC CCGCAGCACC
CGCACCCCCA TCGCGAGCGG CGAGAACCTC TACCTGCGCC ACGGCTTCCG CGAGGCGCTG
GAGCGGGGCG CGCTGGATAT CGCCGCGCCG GACCTGCAGA AGTGCGGCGG GCTGCTGGAG
GGGCGCAGGA TCGCCGACAT GGCCGACGCC CACTACGTGG CCGTGGCGCC GCACTGCATA
GCGAGCCCCA TCGGCACGGT GGCGGCGGCC CACGTGGCCG CCGCCGTCCC CAACTTCCTG
GCGCTTGAGT GGCACGGGAT GAGCGTGCCG TTCTGGGAGG AGATGGCGGC GGGGTTCGAC
GGGCCGGTCA TCCGGGACGG TTACATAGAG GTGCCCGAGG CCCCGGGCCT CGGGGTGGAG
CTCAACGAGG AGGTCGCCCG CCGGTACGCC CGGGAGGGCG AGCCGTTCTT CTAG
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| Protein sequence | MRITDVRTAV VEANYDWTFV RIYTDEGLTG LGESFLAPGL TGIIRDLKPL LVGQDPLDVD
RLFSRMRWAA SGAGSVAGLV YNAISGIEAA LWDLAGKHYG VPVFRLLGGR HRDRVRVYAD
CHAGEALEAL SSVMIPRRPR WLSPAGAPPP AGDPVHGRAF GLEEPGEAFT PEMYAARARE
VAAMGFTALK FDLDVPNPHT LDPHSGTLTH AEIRHMVSLV EAVREAVGDG VDIAFDLHWR
YNVSDAVRLA CELEPYGLMW LEDPVPPENV EALRRVTRST RTPIASGENL YLRHGFREAL
ERGALDIAAP DLQKCGGLLE GRRIADMADA HYVAVAPHCI ASPIGTVAAA HVAAAVPNFL
ALEWHGMSVP FWEEMAAGFD GPVIRDGYIE VPEAPGLGVE LNEEVARRYA REGEPFF
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