| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_3001 |
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| Symbol | |
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| ID | 4115800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 3008682 |
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| End bp | 3009713 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638037771 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_645723 |
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| Protein GI | 108805786 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTGCTGGA GAAGGATCCT GGTTTTGCTG GTGGCGGCCG TCGCCGCGCT CGCCCTCGCC
GCGTGCGCCG AGGTCAGGGA GCAGGGAGGG GGCCAGCAGG GCGGCGGAGA GGGCCGGCAG
GGCCCCATAG AGCTCGCCGT CGTGCCCAAG GCCGTGGGCT TCGACTTCTG GGAGACGGTG
CGTCAGGGGG CGGTGTGCGC CGCCAAGAGG GCCGAGGGCG AGGTCGACGT CCAGTGGGAC
GGGGTCGCCC AGGAGACCGA CGTTACCGGG CAGGTCAACC TGCTGCAGAA CTTCATCACC
CAGGGGGTGG ACGGGCTCGT CTACGCCGCC ACCGACGCCA AGGTGCTCCA CGACGTCACG
CAGCAGGCGC TCGACCAGGG CATAACCGTG GTCAACATAG ACTCCGGCAC CGACCCGCAG
CCCGAGAACG TGCCGGTCTT CGCCACGGAC AACGTGGCGG CCGCCGAGCG GGCGACCGAG
TACCTGGTGG AGCAGCTCGG CGAGGACGGC GGGAAGGTGG CGTTCATCCC CTTCCAGCCC
GGCACGGCGA CGAACGACAC CCGCACGGAG GGCTTCAAGA ACGTCCTCAA GGAGAACCCG
CAGGTAAAGC TCGTCGCCGA GCAGTCCAGC GAGAGCAACT ACAACCGGGC GCTGCAGGTC
ACCGAGGACA TCCTCACCGC CCACCCGGAT CTGGACGCCA TCTACGCGGC CAACGAGCCC
GGCGTGCTGG GCGCCGCCGA GGCGGTGAGG AGCGCCGGGA AGGCCGGGGA GATCATCATC
GTCGGCTGGG ACACCGCCCC CGACGAGCTC AAGGCCGTGC GCGAGGGCGT GGTGAGCGCG
CTCATCGCCC AGAACCCCTT CAGGATGGGC TACGACGGGG TGAACGCGGC GGTGAAGATG
ATCCGTACCG GCGAGCAGGT CGAGGGCGGC GACACGGGGG CGATACTGGT CACCCGGGAG
AACATAGACG ACCCGGAGGT CCAGCGGGTC CTCGACCCGA GCTGCGAGAA CCCGCCCGTC
GAAGGGCAGT AG
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| Protein sequence | MCWRRILVLL VAAVAALALA ACAEVREQGG GQQGGGEGRQ GPIELAVVPK AVGFDFWETV
RQGAVCAAKR AEGEVDVQWD GVAQETDVTG QVNLLQNFIT QGVDGLVYAA TDAKVLHDVT
QQALDQGITV VNIDSGTDPQ PENVPVFATD NVAAAERATE YLVEQLGEDG GKVAFIPFQP
GTATNDTRTE GFKNVLKENP QVKLVAEQSS ESNYNRALQV TEDILTAHPD LDAIYAANEP
GVLGAAEAVR SAGKAGEIII VGWDTAPDEL KAVREGVVSA LIAQNPFRMG YDGVNAAVKM
IRTGEQVEGG DTGAILVTRE NIDDPEVQRV LDPSCENPPV EGQ
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