Gene Rxyl_2999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2999 
Symbol 
ID4115798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp3006795 
End bp3007895 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content77% 
IMG OID638037769 
ProductFMN-dependent alpha-hydroxy acid dehydrogenase 
Protein accessionYP_645721 
Protein GI108805784 
COG category[C] Energy production and conversion 
COG ID[COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCGGT GTAGGGGCGC GGCCCGGCCG CGGGGCGGTA GTATCTCTCG CGTGGAGCCT 
ATCAGCGTCC TCGACTACGA GCCGCTCGCC CGCGAGCGGA TGCACCCCGC GGCCTGGGCG
TACCTCTGCG CCGGAGCGGA GGACGAGGTG ACGCTGCGGG AGAACCGCGC GGCGTTCGAG
CGCCTGCGGC TGGTGCCGCG GGTGCTGCGC GGCGTCTCGG CTCCCGACCT CCGCACGACG
GTGCTCGGGA CGCCGGTGGA GGCCCCGGTC CTGGTCGCCC CGATGGGCGT GCACGGGCTC
GCGCACCCCG AGGGCGAGTG CGCGAGCGCC CGGGGCGCCG GGGAGGCCGG GACGCTCATG
GCCGTCAGCA CCGTCTCCTC GCGGAGCATC GAGGAGGTCT CGGCCTGCGC GACCGGGCCG
CTGTGGTTCC AGCTCTACGT CTACCGCTCG CGCGGCCTCG CCGAGCGCCT CGTGCGCCGG
GCCGAGCGCG CCGGCTGCCG GGCTCTCGTG CTGACGGCGG ACTCCCCGCG CTGGGGCCGC
AAGGAGCGCT TCCTGCGGGT CGCGGGCTCG CTGCCGCCGG GCGCCGACGC GGCGAGCATC
GACAGCGAGG TCGGCGAGGA GGATCTCGCG CCCGCCGCCT TGACCTGGGA GGACGTGGCG
TGGCTGCGCT CGGTTTCGAG CCTCCCCGTC GTCCTCAAGG GCGTTCTCCA CCCCGAGGAC
GCCGTCCTCG CCGTCGAGCA CGGGGCCGCG GGCATAGTCG TCTCCAACCA CGGCGGCAGG
CAGCTCGACG GCGCGCCCGC GAGCATCGAG GCGCTGCCGG CGGTCGTCGA GGCGGTGGCC
GGGGCGTCCG GCGGGCGCGC GGAGGTCTAC CTCGACGGCG GCGTGCGGCG CGGCACGGAC
GTCCTGAAGG CCCTGGCCCT CGGGGCGCGG GCGGTCTTCG TGGGACGTCC GGTCCTCTGG
GGCCTCGCCG TGGGCGGCGC GGAGGGCGTC CGGCGCGTGC TGGGGCTGCT GCGCGGGGAG
CTGGAGCACG CGATGGCGCT CTGCGGGCAG GCGAGCGTCG GGGGGCTCGA CCCGGAGCTC
GTCTCCCGGG GCGCTCGCTA G
 
Protein sequence
MSRCRGAARP RGGSISRVEP ISVLDYEPLA RERMHPAAWA YLCAGAEDEV TLRENRAAFE 
RLRLVPRVLR GVSAPDLRTT VLGTPVEAPV LVAPMGVHGL AHPEGECASA RGAGEAGTLM
AVSTVSSRSI EEVSACATGP LWFQLYVYRS RGLAERLVRR AERAGCRALV LTADSPRWGR
KERFLRVAGS LPPGADAASI DSEVGEEDLA PAALTWEDVA WLRSVSSLPV VLKGVLHPED
AVLAVEHGAA GIVVSNHGGR QLDGAPASIE ALPAVVEAVA GASGGRAEVY LDGGVRRGTD
VLKALALGAR AVFVGRPVLW GLAVGGAEGV RRVLGLLRGE LEHAMALCGQ ASVGGLDPEL
VSRGAR