Gene Rxyl_2990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2990 
Symbol 
ID4115712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2996750 
End bp2997667 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content68% 
IMG OID638037760 
Product3-keto-5-aminohexanoate cleavage enzyme 
Protein accessionYP_645712 
Protein GI108805775 
COG category[S] Function unknown 
COG ID[COG3246] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0496376 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTCAACG CCGTCCCGAG AAACGACCCG GTCATCATCA CCTGCGCGCT CACCGGGGGC 
ATCCACGGCA AGGAGGCAAA CCCCAACCTC CCCGAGCAGC CGGACGAGAT CGTCGAGCAG
GGCGTCGCGG CGTGGGAGGC GGGGGCGGCC ATCCTGCACG TGCACGCCAG AAACCCCGAC
GGCTCCAACA CGATGGACCC TGGGATCTAC TCCGAGCTGC ACGAGCGGCT GTGCGCCGAG
ACCGACGCCA TCGTGCAGCT GACCACCGGC GGCAGCCCGG TGCTCTCCGT GGAGGAGCGC
CTGAACACCG TCTACCTCTG CCCGGAGATG TGCTCGCTGA ACATGGGGCT TTTGAACTTC
TTTATCCGGG GGGAGCAGGT CTTCTTCGCC AACCACCGCT CGGACATAGA GCGCTTTGCC
CGCGAGATCG CCGCCCGGAA CATAAAGCCG GAGCTGGAGG TCTACAGCAG CGCGATGCTG
GAGGAGGTGG CGCACCTGCT CTCTTTGGGC ATCCTGGAGC CGCCCTACAC CATAAACCTC
GTGCTGCACA CCCCCACCCA GGGAGGGCAG CGCGGGACCC CGAGAAACCT CTTCGACATG
CTCCAGCGCC TGGACGAGCT GCCGGTGCCC CGGGAGGAGC TGCGCGTAAA CGTCTCCTCG
ATGGGCCCCA CGCAGCTGCC CATAACCACC ATAGCCCTGG CGATGGGGCT GAACGTGCGG
GTGGGGATGG AGGACAACGT CTACTACCGC AGAGGGGAGC TTCTCGAGAA CAACGCCCAG
CTCGTGGAGC GCACCGCGCG CATCGCGCGG GAGCTGGAGC GGCGGGTGGC GAGCCCCGAC
GAGGCGCGCG GGATGCTGGG GCTGCGCGGC AGGGAGAGGG GCCGCCTGCC CGCCGGGGCC
GAGCGGGCGG CGGGCTGA
 
Protein sequence
MLNAVPRNDP VIITCALTGG IHGKEANPNL PEQPDEIVEQ GVAAWEAGAA ILHVHARNPD 
GSNTMDPGIY SELHERLCAE TDAIVQLTTG GSPVLSVEER LNTVYLCPEM CSLNMGLLNF
FIRGEQVFFA NHRSDIERFA REIAARNIKP ELEVYSSAML EEVAHLLSLG ILEPPYTINL
VLHTPTQGGQ RGTPRNLFDM LQRLDELPVP REELRVNVSS MGPTQLPITT IALAMGLNVR
VGMEDNVYYR RGELLENNAQ LVERTARIAR ELERRVASPD EARGMLGLRG RERGRLPAGA
ERAAG