Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_2988 |
Symbol | |
ID | 4115710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 2994453 |
End bp | 2995472 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 638037758 |
Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
Protein accession | YP_645710 |
Protein GI | 108805773 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.277355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGGCCGC CCGTCGTAGC GCTGACCATG GGAGATCCCG CCGGCATCGG GCCGGAGATC ATCGCCCGGG CCTTCGCCGA GCCCGGCTTC TCGGAGGAGA ACCGCGTCGT CGTGGTCGGG GACGGGGCGA GGCTCGAGCG CGCGGCGGCC CTGCTCCGGC TTCCGCTGCG GATCGAGACC GTGAGCGGTC CCGAGGAGGC CCGCTTCCGG CCCGGCTCCG TCGACCTCAT CCCGGCGAGC CGGCTCCCCG CCGACCTGCC CTTCGGCCGG CTGGACCCCC GGGCCGGGGA CGCCGCCTTC GAGTACCTGA GGCGGGCCGT GGGGCTCGCG CTCGAGGGGA GGGTGAGCGC GGTGGCGACC GCGCCCCTCA ACAAGGAGGC GCTGCACCTG GCCGGGCACC GCTACCCGGG GCACACCGAG ATCCTGGCCG AGCTCACCGG CACCAGAGAC TACGCCATGA TGCTCGTCGC CGACGGGCTG CGGGTCATAC ACGTCTCCAC CCACGTCCCC CTGCGGGAGG CCATAGAGCT GGTGCGCCCC GAGAGGGAGC TTGCGGTCAT CCGGCTGGCG CACGGCGCGA TGCGCCGCAT CGGCCTCGAG AGCCCCCGGG TGGCGGTGGC CGGGCTCAAC CCCCACGCCG GGGAGAACGG GCTCTTCGGG GAGGAGGACC GAGAGCACAT AGCCCCGGCG GTGGAGAGGG CCCGCTCCGA GGGGATAGAC GCCAGCGGCC CGTGGCCGCC GGACACCGTG TTCCTGCGGG CCCGGCGGGG CGAGTTCGAC ATCGTCGTGG TGCAGTACCA CGACCAGGGG CACATCCCGG CCAAGCTTCT GGGCTTCGAG GGCGGGGTGA ACGTGACGGT GGGGCTGCCG TTCTTCCGCA CCAGCGTGGA CCACGGCACC GCCTTCGACA TCGCCGGCAC GGGGAGGGCC GACCACTCCA GCCTGCTGGC GGCGCTCCGC CTGGCGCGGG AGCTCGCCGG GGCGCAGGAG GAGGATCGGC AGAAGAAGAG GAGGGGTTGA
|
Protein sequence | MRPPVVALTM GDPAGIGPEI IARAFAEPGF SEENRVVVVG DGARLERAAA LLRLPLRIET VSGPEEARFR PGSVDLIPAS RLPADLPFGR LDPRAGDAAF EYLRRAVGLA LEGRVSAVAT APLNKEALHL AGHRYPGHTE ILAELTGTRD YAMMLVADGL RVIHVSTHVP LREAIELVRP ERELAVIRLA HGAMRRIGLE SPRVAVAGLN PHAGENGLFG EEDREHIAPA VERARSEGID ASGPWPPDTV FLRARRGEFD IVVVQYHDQG HIPAKLLGFE GGVNVTVGLP FFRTSVDHGT AFDIAGTGRA DHSSLLAALR LARELAGAQE EDRQKKRRG
|
| |