| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2984 |
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| Symbol | |
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| ID | 4115706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 2989056 |
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| End bp | 2990738 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 638037754 |
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| Product | hypothetical protein |
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| Protein accession | YP_645706 |
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| Protein GI | 108805769 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex
[COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGCGGG TGGTCGGCGG CGACCCCCGC TTTGCGTGGG AGGGGCCCCT GCTGCGGGCG
GCCGACCCGC GGGGCCTGGA CCTGCGCGAG GCGCCCTACG TGGTCTTCGA CCTCGAGACC
ACGGGGTCTT CGGCCCGCGA GGGGGGCATC ACCGAGCTCG GCGCGCTGAA GCTGGTGCGG
GGGAGGGTGG TGGACCGCTT CTCCACGCTG GTCAACCCGG GGCGTCCCAT AGAGCCCTTC
GTGGCGAGGC TCACCGGCAT CACCGACGAG ATGGTCTCCG GGGCCCCTCC GGCCCGGGAG
GTGATCCCCC GCTTCGAGGA GTTCGCCGAG GGCTCGGTGC TCGTCGCCCA CAACGCCGGC
TTCGACTGCT CCTTTCTGGC GGCGGCGCGC GGGGGGCGCG GCCTCCCCAA CCCGGTCCTG
GACACCCTCA GGCTGGCCCG GCTGCTGGTC CCCGGCCTGC GGCGCTACCG GCTCTCCGCC
CTGGTCTCGC ACTTCGGGGT CCGGCAGGCC CCCAACCACC GGGCCCTCGC GGACGCCGCG
GCCACCGCCG GGGTCTTCCT GCACCTGCTG CGCCTGCTGC GGGCGGCGGG GGTGGGGAGC
GTGGGGGAGG CGCTCGCGCT CCGGGGAGGC GGCGCGAGGC GCATCCCGCC GCAGAAGCGG
CACCTGGCCG AGGGGCTGCC CGCCTCCTGC GGGGTCTACT ACTTCCTGGA CGGCGGCGGG
GGCGTGCTCT ACGTGGGCAA GGCCAAGAAC CTGCGGGCCC GGGTGCGCAC CTACTTCAAC
GGCGGCGACG GCCGGAGGAA GGTCCGGCGG CTGGTGGAGG AGGTCGCCGC CGTCCGGTTC
CGCACGACGG GGACGGAGCT CGAGGCCCTG CTGCTCGAGG CGCGGGAGAT AAGGCGGCTC
TCCCCCCGCT ACAACACCGC GGGCCGCGAG GAGGGGGGGC GCTGGTACAT CGGGTTCCCC
CGCGGGGAGC CCTACCCGGT GCCCGAGCGG GTCTCCGGGG AGGAGGCCGG GGACGGGTTC
CTCCTCCTGC TCGGCCCGTA CCGCAGCGCG GGGATGGTGG ACGCGTGCGT CGAGGCGCTG
GGCCGCATCT TCCCGCTGCG CCGGTGCTCG GGGGAGGGCG GGCCCTGCCT CTACGGCCAG
ATGGGGCGGT GCGCGCCGTG TATGGGCATG GAGAGCGGGG AGTACGCCCG GGAGGTGGTG
GGGGGCGTCG CCGCCCTGCT GCGCGGGGAG GACGGGGGCG GGCGGCTCGA GGCGCTGAGG
CGGGAGCGGG ACCGGCTCGC CGCGGCGCTG GAGTTCGAGG CTGCCGCCCG GCTCCGGGAC
CTCGTCTCGG GGATAGAGCG TCTGCGCCTG GCCCGCACCC TCGGAACCTC CGGCGTCCCG
CAGGCCGTTG TCGCCCCCTC CACCGAGCCC GGCATGGTCG AGGTCTTCGC CTTCGAGGGC
GGCGGGCTGC TGGCCCACGG GGGCTTCGAG GCGGGCGACG AGGAGGGGCT GCGGGGGTTC
GCCGCCCGGG CGCGGGCCGC CCGGCGCGGG GGGAGCGGAG GCGGGGTGGA CGAGGCGCGC
GTCGTCCTGG CCTACCTCCG GCGGCGCTCC GGGCTCGTCG AGGTCGCCCG CCTCGACGGC
GGGGACGGGG GGCTGCTCGA GGCCGCCCGG AGGGTAGGGA GAGCGGGCGG CATGGTACAA
TAG
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| Protein sequence | MERVVGGDPR FAWEGPLLRA ADPRGLDLRE APYVVFDLET TGSSAREGGI TELGALKLVR
GRVVDRFSTL VNPGRPIEPF VARLTGITDE MVSGAPPARE VIPRFEEFAE GSVLVAHNAG
FDCSFLAAAR GGRGLPNPVL DTLRLARLLV PGLRRYRLSA LVSHFGVRQA PNHRALADAA
ATAGVFLHLL RLLRAAGVGS VGEALALRGG GARRIPPQKR HLAEGLPASC GVYYFLDGGG
GVLYVGKAKN LRARVRTYFN GGDGRRKVRR LVEEVAAVRF RTTGTELEAL LLEAREIRRL
SPRYNTAGRE EGGRWYIGFP RGEPYPVPER VSGEEAGDGF LLLLGPYRSA GMVDACVEAL
GRIFPLRRCS GEGGPCLYGQ MGRCAPCMGM ESGEYAREVV GGVAALLRGE DGGGRLEALR
RERDRLAAAL EFEAAARLRD LVSGIERLRL ARTLGTSGVP QAVVAPSTEP GMVEVFAFEG
GGLLAHGGFE AGDEEGLRGF AARARAARRG GSGGGVDEAR VVLAYLRRRS GLVEVARLDG
GDGGLLEAAR RVGRAGGMVQ
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