Gene Rxyl_2978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2978 
Symbol 
ID4115700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp2983014 
End bp2983619 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content73% 
IMG OID638037748 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_645700 
Protein GI108805763 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCTGC CGCACCGCGA GTCCGGAAGG AGATCCTACG CCTACAAGGA GGCGCTGCGG 
CAGCTGCTAA ACCCGCTCGT GCGGGTGCTC TCCCGCCTGA GGGTGCGCCC GAACACCCTG 
ACGGTGACCG GGTGGGCGCT CTCGGTGTGC GCCGCCTTCC TGTTCGGGAC CGGCCACGTG 
AGGCTGGCCG GGGCGGTGAT GCTGCTCGGC GGGCTCTTCG ACGCCCTCGA CGGCGCCGTG 
GCCCGGGAGT CGAACCGCAT GAGCTCCTTC GGCGCCTTTC TGGACTCCAC CCTGGACCGG 
CTCTCGGAGG CGGCGATCTT CGCGGGCATC ATCTTTCTGT ACGCGGCCCT GGACCGCCCC 
TACGTGGCCC TGCTCGCCGC GGTGGCGATG ACGTTCTCGC TCCTTACCTC CTACACCCGC 
GCCCGCGCCG AGGGGCTCGG CGTGGAGTGC CGGGTGGGGG TGCTGGAGCG CGCCGGCCGC 
GTGGTGCTCC TCTCGGCCTT CTCGCTCCTG GGCTTCCTGG GGCCCGGCCT GGCGCTGGTG 
GCGGCCGGGG CCCTGGTGAC CACGCTCCAG CGCATCCTCC ACGTCCGCCG CGCTACCCGT 
GGCTAG
 
Protein sequence
MSLPHRESGR RSYAYKEALR QLLNPLVRVL SRLRVRPNTL TVTGWALSVC AAFLFGTGHV 
RLAGAVMLLG GLFDALDGAV ARESNRMSSF GAFLDSTLDR LSEAAIFAGI IFLYAALDRP 
YVALLAAVAM TFSLLTSYTR ARAEGLGVEC RVGVLERAGR VVLLSAFSLL GFLGPGLALV 
AAGALVTTLQ RILHVRRATR G