| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2956 |
|---|
| Symbol | |
|---|
| ID | 4115951 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 2965084 |
|---|
| End bp | 2965617 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638037726 |
|---|
| Product | cytochrome b subunit of the bc complex-like protein |
|---|
| Protein accession | YP_645678 |
|---|
| Protein GI | 108805741 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1290] Cytochrome b subunit of the bc complex |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGA TAGAGCGCAG AGACACCACC AAGACCGACC CGCAGCAGGA CGCTGTGCAG
GGGCGGGCCG CGCCTGCGCG GCCGGTCGAG GAGGAGGTCA TCACCGAGGA GAACGTCTTC
GACCGTCCGG ACGAGACGAT GGCGTTCTTC CCCGGGCAGG TCTTCCGCGA CGGGGTGGTG
GCCACGCTGC TCCTCATTGC CTGCACCGTG CTCTCCTACG TGTCTCCCGC GCCGCTCGCC
GAGCCGGCCA ACACCGCCAC GATCACCTAC GTGCCGCGGC CGGAGTGGTT CTTCTTCTTC
TACGAGCAGA TGCTCATGTT CTTCCCCGGC TACGCGCTCA TCTCCTTCGG GGCGGTCGTG
GTGCCGACGA TCTTTATAGC GCTGTTGTTC GCGGTGCCGT GGCTGGACCG CAGCCCGCAC
TACAGCCCGA TGAAGCGTCC CTTCGCCATC GTGGTGGGAG TGCTGGTGAT CATCACGGTG
CTGCTCAACA TGCTGCTGGC CGTCAGCCGG GTGATCAACT TCCCGAGTGG GTAG
|
|---|
| Protein sequence | MTEIERRDTT KTDPQQDAVQ GRAAPARPVE EEVITEENVF DRPDETMAFF PGQVFRDGVV
ATLLLIACTV LSYVSPAPLA EPANTATITY VPRPEWFFFF YEQMLMFFPG YALISFGAVV
VPTIFIALLF AVPWLDRSPH YSPMKRPFAI VVGVLVIITV LLNMLLAVSR VINFPSG
|
|---|
| |