| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2927 |
|---|
| Symbol | |
|---|
| ID | 4115883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 2935250 |
|---|
| End bp | 2936167 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 638037697 |
|---|
| Product | ornithine cyclodeaminase |
|---|
| Protein accession | YP_645649 |
|---|
| Protein GI | 108805712 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGGGTCT TCGGCGCGAA GGAGACGGCG GATCTCTTGC CCTACGGCCC CCTGGCGGAG
AGCATCCGCG CGGTCGCCCT CGCCGCGCGC GAGGGACGGG CGAAGGCCCC GCCGCGGGTG
CGCGTCCCGC TGCCGGGGGG CGGGGCGCTC CTGATCATGC CCGCCTCCGA CGGGGAGCTG
GCGATCACCA AGCTCGTCAC GGTCCACCCG GGGAACGCCG CCCGCGGGAT GCCCACCGTC
CAGGGCGAGG TGGTGGCGCT TGAGGCGGCG ACCGGGCGGC GGCTCGGGCT GCTGGAGGGC
GGCGCGCTCA CCGCGCGGCG CACCGCCGCG CTCAGCCTGC TCGCCGCGCG GGAGCTCGCC
CCCCGACCGG AGGGGCCGCT CCTCATCGTG GGCGCGGGCA CCCAGGGGCG CTCGCACCTG
GAGGCCTTCC GGGAGGGGCT CGGCGTCCGC CGGGCGTTTA TCGTCTCCCG CACCCGGCAG
AGCGCGCGGG GCCTCGCGGA GCACGCGCAG AGCAGCCTGG GCATGGAGGC CCGGGCCGTG
CGCAGCCCGG AGGAGGCGCT CGGGGAGGCC CGGCTCGTGG TCACCGCAAC CACCAGCCGC
GAGCCCGTGC TGCCGGGGGC GCTCCACCCG GAGACCTTCG TCGCCGCGGT GGGGGCCTAC
ACCCCGGAGA TGGCCGAGCT CCCGCCCGCC CTGGTGGCGG GCTCGAGCGT CTTCGTGGAC
ACGCTGGAGG GGGCGCGGGA GGAGGCCGGG GACCTCCTGC GGGCGGCGGG CGAGGGCCGG
TTCCGGTGGG AGGAGGCGGG GGAGCTCGCC GACGCGCTGC GGGGAAACCG GCCGCCTCCG
GGAAGGCCGG TCGTCTTCAA GAGCGTGGGC CACGCCCTGT GGGACCTCGC CGCCGCCCGC
CGCGCCCTGC TGCGCTAG
|
|---|
| Protein sequence | MRVFGAKETA DLLPYGPLAE SIRAVALAAR EGRAKAPPRV RVPLPGGGAL LIMPASDGEL
AITKLVTVHP GNAARGMPTV QGEVVALEAA TGRRLGLLEG GALTARRTAA LSLLAARELA
PRPEGPLLIV GAGTQGRSHL EAFREGLGVR RAFIVSRTRQ SARGLAEHAQ SSLGMEARAV
RSPEEALGEA RLVVTATTSR EPVLPGALHP ETFVAAVGAY TPEMAELPPA LVAGSSVFVD
TLEGAREEAG DLLRAAGEGR FRWEEAGELA DALRGNRPPP GRPVVFKSVG HALWDLAAAR
RALLR
|
|---|
| |