| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2924 |
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| Symbol | |
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| ID | 4115880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 2930972 |
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| End bp | 2932393 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638037694 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_645646 |
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| Protein GI | 108805709 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00909] amino acid transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.670343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGAGC TGCTGCGCAA GAAGGACATC CCCACGCTGC AGCGGGAGGC CGCGGGGGAC
ACCGGCCTGA AGCGCACCCT CGGGGTGTGG AGCCTCACGT TCATCGGGCT GGGGGGCATC
ATCGGGGTCG GGGTCTTCGT GCTCACGGGC GTCGTCGCCG CGAACCAGGC CGGCCCGGCG
GTCGCGCTCT CTTTCGTCGT CGCCGGGATC GCCAGCGCCG CCGCCGCGCT GTGCTACGCG
GAGTTCGCCG GCATGATCCC GGTCTCCGGC AGCGCCTACA CCTACGGGTA CGCGGTGCTC
GGGGAGTTCT TCGCCTGGGT CATCGGCTGG GACCTCCTGA TCGAGTACAC CCTCGTCGTC
GCGGTGGTCG CCATAGGCAT CTCGGGCTAC ATAAACGAGC TGCTCTCCGG GCTCGGGGTG
GGGGTGCCCG AGTGGGCGGC CTCGGCTCCC GGCGGGGGAG ACGGCGGCGT GGTGAACCTG
TTCGCCGTGC TGCTCTGCCT GTTCATAGCC GGGCTGCAGA TCCGGGGCAT CCGCGAGAGC
GCCAACTTCA ACAACGCGAT GGTCGTCCTG AAGCTCGCGA TCATCGCGGT CATCATCGCC
CTCGGGGCGT TCTTCGTGGA CCCGGCCAAC CTCACGCCCT TCTTCCCGTA CGGGATCGGG
GGGGTCTTCA CCGGGGCCGC GGTCGTGTTC TTCGCGGTCT TCGGCTACGA CACCCTCACC
ACCGCGGCGG AGGAGGCGAC CGATCCGCAG CGCGACCTGC CGCGGGCGGT GATCCTCTCG
CTGGCGATAG CGCTGGTGCT CTACGTGCTC ATGAGCCTGG TGGTGACCGG CATGGTGCCC
TACAGGCAGC TGGACACCCC GGCCCCGGTG GCCGTGGCCT TTCAGGAGGC GGGCCTGCCG
TGGGTGGCGC GGGTGATCTC GGTGGCGGCC ATCGCGGGGA TCATCAGCGT GCTCTTCGCC
TTCATGCTGG GGGCGGCCCG CGTCTGGTTC GCCATGAGCC GCGACGGCCT GCTGCCCCGC
TGGTTCTGCC GGCTGCACCC CGCCTACCGC ACGCCCTACA GGCCGACGGC GATCCTCGGG
GTGGCCACGG CCCTGGTGGC GGGGTTCTTC CCCATAACCG CCGTCGCGGA GCTGGTGAAC
ATCGGGGTGC TCTCGGCCTT TATCATCGTG TGCGCCTCGG TCTGGGTCCT GCGGCACACC
CGCCCCGACC TGCCCCGGGC CTTCAGGACG CCGCTGGTGC CCCTGGTCCC GATCCTCGGG
ATGGCGTTCT CCGCCGTGCT GATCGCGAGC CTGCCCCCGG CGACCTGGCT CCGGTTCGTG
GCGTGGATGG CGGTGGGGCT CGTGATCTAC TTTCTCTACT CCCGGCGCCG GAGCCTCCTG
GCCCGCGGCG AGCTGGGCAT CGAGCGGGAC CTGGTGGAGT AA
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| Protein sequence | MSELLRKKDI PTLQREAAGD TGLKRTLGVW SLTFIGLGGI IGVGVFVLTG VVAANQAGPA
VALSFVVAGI ASAAAALCYA EFAGMIPVSG SAYTYGYAVL GEFFAWVIGW DLLIEYTLVV
AVVAIGISGY INELLSGLGV GVPEWAASAP GGGDGGVVNL FAVLLCLFIA GLQIRGIRES
ANFNNAMVVL KLAIIAVIIA LGAFFVDPAN LTPFFPYGIG GVFTGAAVVF FAVFGYDTLT
TAAEEATDPQ RDLPRAVILS LAIALVLYVL MSLVVTGMVP YRQLDTPAPV AVAFQEAGLP
WVARVISVAA IAGIISVLFA FMLGAARVWF AMSRDGLLPR WFCRLHPAYR TPYRPTAILG
VATALVAGFF PITAVAELVN IGVLSAFIIV CASVWVLRHT RPDLPRAFRT PLVPLVPILG
MAFSAVLIAS LPPATWLRFV AWMAVGLVIY FLYSRRRSLL ARGELGIERD LVE
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