| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2919 |
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| Symbol | |
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| ID | 4117398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 2924403 |
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| End bp | 2926148 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 638037689 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_645641 |
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| Protein GI | 108805704 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCGA CCCACCCCGG CTGGCTGGAG GGAGACCCCT GGGAGCGGCA GGGCGCGGAG
GGCACGCGCC GGCTGCTGGA GCGGGCTGTG GCCGCCAGCT CGGGCGGCAT AGTCATCACC
GACCCCAACC TCCCCGACAA CCCCATCATC TACGTCAACC CGGCCTTCGA GCGGATAACC
GGCTACTCGA GGCGGGAGGT GGTGGGCCGC AACTGCCGCT TTCTGCAGCG GGAGGACCGG
GGGCAGGCGG AGCTGGAGGT TCTCCGCCAG GCGATGGCCG AGCGGAGGGA CTGCCGGGTG
GTGCTGCGCA ACTACCGGCG CGACGGGAGG ATGTTCTGGA ACGAGCTGTA CGTCTCCCCC
GTCTACGACG AGGACGGCCG CCTGGTGAAC TTTATCGGGG TGCAGAACGA CATCACCGAG
CGCAAGCGGA TGGAGGAGGA GCGCAACCTG CTGCTCGCCC GCGAGCAGCT CGCCCGCGCG
GAGGCGGTGA AGGCCCAGCG CCGCCTGAGC TTTCTGGCCG GGGCCGACGC CCTGCTGCTC
TCCACGGTGG ACTACCCGGG GCGCCTCCGG CAGACCGCCA GGATAGCCGT CCCGGAGCTG
GCGGACTGGT GCGTGGTGGA CGTGCTGAAC GAGGACGGCT CGGTGCGCCA GATCGCGGCG
GCCCACGCCG AGCCCTCCCG CGAGGAGCTG CTCGAGGAGC TGGGCCGTAT CCGCGAGCGC
CACGGGCGGC CGCCCGGTCT GGTGGCCCGG GTGCTCAAGG AGGGGCGCCC GGTGCTCGTC
GAGCGGGTCG GGGAGGGCGC GCTCGAGGAG AACGCCCTCG GGCCGGACCA TCTGGAGGTG
CTACGTAGGC TCGAGGTCCG CTCCCTGATC GTCGTGCCGC TGCTCGCCCG CGGCAGGACG
ATAGGGGCGA TGAGCCTCGT CTCCTCCCGC GAGGACCGCT CCTACGGGGA GGAGGAGCTC
TCGCTGGCCC GCAGCCTGGC CTACCGCTGC GCGCTCGCCG TGGACAACGC CCGGCTCTAC
CACGAGCGGG GCCGGATAGC CAGCATATTG CAGCAGAGCC TCCTACCCCG CCTGCCGGAG
CCCGAGGGGC TCGACGTCGG GGTCGAGTAC CTGCCGGTCG GCCGGGAGAA CGAGGCCGGC
GGGGACTTCT ACGACCTGAT CGAGACCGGC CGCGGGTGGC TGGCTGTGAT CGGCGACGTG
CGGGGCAAGG GGGCGGCGGC GGCCGCGATC ACCGCCCTCG CCCGTTACAC GATCCGGGCG
GTTGCCATGC GCGAGGGCTC CCCCTCCAGG GTCCTCTCGG ACCTGAACGA GGCGATGCTG
CGCCAGCTGG AGGGGCACCG CTTCTGCACG GTGGCGTGCG CGGGGCTGAG CCGGAACGGG
GCCGGGCTGG AGCTGAGCGT GGCGCGGGCG GGGCACCCCG CGCCGCTGCT GCTGCGCCGC
GACGGGCGGG TGGAGACGCT GGAGGTGCCC GGCCGGGCGC TCGGGGTCTT CGCGGACCCC
CGGCTGGCGG AGCGCCCGGC GCACCTGGAG CCCGGGGACG CCGCCGTCTT CTACACCGAC
GGGGTCACCG AGGTTCGCAG CCCGGGGGGC AGCCTCTTCG GGGAGGAGAG GCTGCGCCGG
CTGCTCGGCT CCTGCGCGGG CCTCGGGGCC GGCCGGATCG CCGCGCGCGT CAGGGAGGAG
GCTCTGAAGC ACGGCGGGGG AGGGCTGCGG GACGACCTGG CCGTGCTCGT GGTCAGGGCC
GCCTGA
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| Protein sequence | MNATHPGWLE GDPWERQGAE GTRRLLERAV AASSGGIVIT DPNLPDNPII YVNPAFERIT
GYSRREVVGR NCRFLQREDR GQAELEVLRQ AMAERRDCRV VLRNYRRDGR MFWNELYVSP
VYDEDGRLVN FIGVQNDITE RKRMEEERNL LLAREQLARA EAVKAQRRLS FLAGADALLL
STVDYPGRLR QTARIAVPEL ADWCVVDVLN EDGSVRQIAA AHAEPSREEL LEELGRIRER
HGRPPGLVAR VLKEGRPVLV ERVGEGALEE NALGPDHLEV LRRLEVRSLI VVPLLARGRT
IGAMSLVSSR EDRSYGEEEL SLARSLAYRC ALAVDNARLY HERGRIASIL QQSLLPRLPE
PEGLDVGVEY LPVGRENEAG GDFYDLIETG RGWLAVIGDV RGKGAAAAAI TALARYTIRA
VAMREGSPSR VLSDLNEAML RQLEGHRFCT VACAGLSRNG AGLELSVARA GHPAPLLLRR
DGRVETLEVP GRALGVFADP RLAERPAHLE PGDAAVFYTD GVTEVRSPGG SLFGEERLRR
LLGSCAGLGA GRIAARVREE ALKHGGGGLR DDLAVLVVRA A
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